RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 KRTAP13-4Q3LI77 160 aa3.48□□□□□ -1.85
NEDD4L-230ENST00000590638 MT2AP02795 61 aa3.47□□□□□ -1.85
NEDD4L-230ENST00000590638 K7ERS5 55 aa3.46□□□□□ -1.86
NEDD4L-230ENST00000590638 MT1FP04733 61 aa3.44□□□□□ -1.86
NEDD4L-230ENST00000590638 A0A0D9SG42 100 aa3.43□□□□□ -1.86
NEDD4L-230ENST00000590638 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
NEDD4L-230ENST00000590638 LINC01554Q52M75 96 aa3.41□□□□□ -1.86
NEDD4L-230ENST00000590638 SPRR2GQ9BYE4 73 aa3.41□□□□□ -1.86
NEDD4L-230ENST00000590638 SSPOA2VEC9 5147 aa3.4□□□□□ -1.87
NEDD4L-230ENST00000590638 A6NN06 94 aa3.39□□□□□ -1.87
NEDD4L-230ENST00000590638 PMAIP1Q13794 54 aa3.38□□□□□ -1.87
NEDD4L-230ENST00000590638 USH2AO75445 5202 aa3.37□□□□□ -1.87
NEDD4L-230ENST00000590638 KRTAP12-1P59990 96 aa3.37□□□□□ -1.87
NEDD4L-230ENST00000590638 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
NEDD4L-230ENST00000590638 FCGBPQ9Y6R7 5405 aaPredicted RBP3.33□□□□□ -1.88
NEDD4L-230ENST00000590638 KRTAP19-8Q3LI54 63 aa3.32□□□□□ -1.88
NEDD4L-230ENST00000590638 PLAC4Q8WY50 150 aa3.32□□□□□ -1.88
NEDD4L-230ENST00000590638 KTN1-AS1Q86SY8 53 aa3.3□□□□□ -1.88
NEDD4L-230ENST00000590638 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
NEDD4L-230ENST00000590638 KRTAP25-1Q3LHN0 102 aa3.28□□□□□ -1.88
NEDD4L-230ENST00000590638 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
NEDD4L-230ENST00000590638 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
NEDD4L-230ENST00000590638 MT1BP07438 61 aa3.26□□□□□ -1.89
NEDD4L-230ENST00000590638 ROMO1P60602 79 aa3.24□□□□□ -1.89
NEDD4L-230ENST00000590638 NEBP20929 6669 aa3.21□□□□□ -1.9
NEDD4L-230ENST00000590638 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
NEDD4L-230ENST00000590638 C10orf95Q9H7T3 257 aa3.19□□□□□ -1.9
NEDD4L-230ENST00000590638 PRO2289Q9P1D8 64 aa3.17□□□□□ -1.9
NEDD4L-230ENST00000590638 MT1XP80297 61 aa3.14□□□□□ -1.91
NEDD4L-230ENST00000590638 TNP1P09430 55 aa3.13□□□□□ -1.91
NEDD4L-230ENST00000590638 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
NEDD4L-230ENST00000590638 KRTAP19-6Q3LI70 58 aa3.13□□□□□ -1.91
NEDD4L-230ENST00000590638 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
NEDD4L-230ENST00000590638 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
NEDD4L-230ENST00000590638 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
NEDD4L-230ENST00000590638 KRTAP2-3P0C7H8 128 aa2.96□□□□□ -1.94
NEDD4L-230ENST00000590638 KRTAP2-4Q9BYR9 128 aa2.96□□□□□ -1.94
NEDD4L-230ENST00000590638 KMT2DO14686 5537 aa2.94□□□□□ -1.94
NEDD4L-230ENST00000590638 MDN1Q9NU22 5596 aa2.93□□□□□ -1.94
NEDD4L-230ENST00000590638 KRTAP8-1Q8IUC2 63 aa2.92□□□□□ -1.94
NEDD4L-230ENST00000590638 KRTAP12-3P60328 96 aa2.91□□□□□ -1.94
NEDD4L-230ENST00000590638 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
NEDD4L-230ENST00000590638 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.95
NEDD4L-230ENST00000590638 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.95
NEDD4L-230ENST00000590638 KRTAP19-7Q3SYF9 63 aa2.8□□□□□ -1.96
NEDD4L-230ENST00000590638 SPRR2EP22531 72 aa2.77□□□□□ -1.97
NEDD4L-230ENST00000590638 SPRR2BP35325 72 aa2.77□□□□□ -1.97
NEDD4L-230ENST00000590638 SPRR2AP35326 72 aa2.77□□□□□ -1.97
NEDD4L-230ENST00000590638 MT1EP04732 61 aa2.76□□□□□ -1.97
NEDD4L-230ENST00000590638 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
NEDD4L-230ENST00000590638 KRTAP12-4P60329 112 aa2.73□□□□□ -1.97
NEDD4L-230ENST00000590638 SPRR2FQ96RM1 72 aa2.73□□□□□ -1.97
NEDD4L-230ENST00000590638 MT1LQ93083 61 aa2.71□□□□□ -1.98
NEDD4L-230ENST00000590638 SPRR2DP22532 72 aa2.68□□□□□ -1.98
NEDD4L-230ENST00000590638 KRTAP19-3Q7Z4W3 81 aa2.68□□□□□ -1.98
NEDD4L-230ENST00000590638 MT1GP13640 62 aa2.66□□□□□ -1.98
NEDD4L-230ENST00000590638 MT1MQ8N339 61 aa2.61□□□□□ -1.99
NEDD4L-230ENST00000590638 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
NEDD4L-230ENST00000590638 DSTQ03001 7570 aaKnown RBP2.56□□□□□ -2
NEDD4L-230ENST00000590638 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
NEDD4L-230ENST00000590638 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
NEDD4L-230ENST00000590638 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
NEDD4L-230ENST00000590638 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
NEDD4L-230ENST00000590638 MT4P47944 62 aa2.36□□□□□ -2.03
NEDD4L-230ENST00000590638 MT1AP04731 61 aa2.31□□□□□ -2.04
NEDD4L-230ENST00000590638 INE1O15225 51 aa2.3□□□□□ -2.04
NEDD4L-230ENST00000590638 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
NEDD4L-230ENST00000590638 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
NEDD4L-230ENST00000590638 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
NEDD4L-230ENST00000590638 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.07
NEDD4L-230ENST00000590638 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
NEDD4L-230ENST00000590638 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
NEDD4L-230ENST00000590638 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
NEDD4L-230ENST00000590638 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
NEDD4L-230ENST00000590638 PRM1P04553 51 aa1.68□□□□□ -2.14
NEDD4L-230ENST00000590638 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
NEDD4L-230ENST00000590638 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
NEDD4L-230ENST00000590638 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 98.7 ms