RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 CDC42SE1Q9NRR8 79 aa8.02□□□□□ -1.13
R3HDM4-206ENST00000590454 LCE3AQ5TA76 89 aa8.01□□□□□ -1.13
R3HDM4-206ENST00000590454 KRTAP19-5Q3LI72 72 aa7.97□□□□□ -1.13
R3HDM4-206ENST00000590454 MT1EP04732 61 aa7.93□□□□□ -1.14
R3HDM4-206ENST00000590454 KRTAP25-1Q3LHN0 102 aa7.88□□□□□ -1.15
R3HDM4-206ENST00000590454 LCE5AQ5TCM9 118 aa7.84□□□□□ -1.15
R3HDM4-206ENST00000590454 LCE1DQ5T752 114 aa7.82□□□□□ -1.16
R3HDM4-206ENST00000590454 ROMO1P60602 79 aa7.75□□□□□ -1.17
R3HDM4-206ENST00000590454 KRTAP19-3Q7Z4W3 81 aa7.74□□□□□ -1.17
R3HDM4-206ENST00000590454 KRTAP12-3P60328 96 aa7.67□□□□□ -1.18
R3HDM4-206ENST00000590454 MT1LQ93083 61 aa7.67□□□□□ -1.18
R3HDM4-206ENST00000590454 BRK1Q8WUW1 75 aa7.66□□□□□ -1.18
R3HDM4-206ENST00000590454 MT4P47944 62 aa7.65□□□□□ -1.18
R3HDM4-206ENST00000590454 LCE4AQ5TA78 99 aa7.65□□□□□ -1.18
R3HDM4-206ENST00000590454 HMCN1Q96RW7 5635 aa7.59□□□□□ -1.19
R3HDM4-206ENST00000590454 KRTAP5-10Q6L8G5 202 aa7.59□□□□□ -1.19
R3HDM4-206ENST00000590454 KRTAP23-1A1A580 65 aa7.58□□□□□ -1.2
R3HDM4-206ENST00000590454 MT1GP13640 62 aa7.58□□□□□ -1.2
R3HDM4-206ENST00000590454 MT1MQ8N339 61 aa7.52□□□□□ -1.21
R3HDM4-206ENST00000590454 AHNAK2Q8IVF2 5795 aa7.52□□□□□ -1.21
R3HDM4-206ENST00000590454 PP632Q6XCG6 107 aa7.47□□□□□ -1.21
R3HDM4-206ENST00000590454 KRTAP4-3Q9BYR4 195 aa7.41□□□□□ -1.22
R3HDM4-206ENST00000590454 KRTAP5-7Q6L8G8 165 aa7.39□□□□□ -1.23
R3HDM4-206ENST00000590454 KRTAP4-7Q9BYR0 210 aa7.39□□□□□ -1.23
R3HDM4-206ENST00000590454 KRTAP5-4Q6L8H1 288 aa7.37□□□□□ -1.23
R3HDM4-206ENST00000590454 KRTAP4-6Q9BYQ5 205 aa7.36□□□□□ -1.23
R3HDM4-206ENST00000590454 KRTAP15-1Q3LI76 137 aa7.31□□□□□ -1.24
R3HDM4-206ENST00000590454 KRTAP5-3Q6L8H2 238 aa7.27□□□□□ -1.25
R3HDM4-206ENST00000590454 PMAIP1Q13794 54 aa7.21□□□□□ -1.26
R3HDM4-206ENST00000590454 KRTAP19-4Q3LI73 84 aa7.12□□□□□ -1.27
R3HDM4-206ENST00000590454 SPRR5A0A1B0GTR4 108 aa7.11□□□□□ -1.27
R3HDM4-206ENST00000590454 LCE3CQ5T5A8 94 aa7.11□□□□□ -1.27
R3HDM4-206ENST00000590454 PRO0628Q9UI54 55 aa7.05□□□□□ -1.28
R3HDM4-206ENST00000590454 KRTAP20-2Q3LI61 65 aa7□□□□□ -1.29
R3HDM4-206ENST00000590454 LOC100996750A0A140TA64 210 aa6.97□□□□□ -1.29
R3HDM4-206ENST00000590454 PRAC1Q96KF2 57 aa6.93□□□□□ -1.3
R3HDM4-206ENST00000590454 KRTAP5-5Q701N2 237 aaPredicted RBP6.86□□□□□ -1.31
R3HDM4-206ENST00000590454 KRTAP12-4P60329 112 aa6.8□□□□□ -1.32
R3HDM4-206ENST00000590454 KRTAP9-6A8MVA2 160 aa6.78□□□□□ -1.32
R3HDM4-206ENST00000590454 KTN1-AS1Q86SY8 53 aa6.64□□□□□ -1.35
R3HDM4-206ENST00000590454 SYNE1Q8NF91 8797 aaKnown RBP6.6□□□□□ -1.35
R3HDM4-206ENST00000590454 KRTAP4-11Q9BYQ6 195 aa6.56□□□□□ -1.36
R3HDM4-206ENST00000590454 MT1AP04731 61 aa6.5□□□□□ -1.37
R3HDM4-206ENST00000590454 KRTAP6-1Q3LI64 71 aa6.49□□□□□ -1.37
R3HDM4-206ENST00000590454 KRTAP5-8O75690 187 aa6.36□□□□□ -1.39
R3HDM4-206ENST00000590454 MUC5ACP98088 5654 aa6.35□□□□□ -1.39
R3HDM4-206ENST00000590454 AHNAKQ09666 5890 aaKnown RBP6.35□□□□□ -1.39
R3HDM4-206ENST00000590454 KRTAP5-2Q701N4 177 aa6.33□□□□□ -1.4
R3HDM4-206ENST00000590454 SVIPQ8NHG7 77 aa6.31□□□□□ -1.4
R3HDM4-206ENST00000590454 MUC5BQ9HC84 5762 aaPredicted RBP6.27□□□□□ -1.41
R3HDM4-206ENST00000590454 KRTAP9-4Q9BYQ2 154 aa6.24□□□□□ -1.41
R3HDM4-206ENST00000590454 KRTAP9-9Q9BYP9 154 aa6.16□□□□□ -1.42
R3HDM4-206ENST00000590454 KRTAP6-2Q3LI66 62 aa6.1□□□□□ -1.43
R3HDM4-206ENST00000590454 OBSCNQ5VST9 7968 aa6.06□□□□□ -1.44
R3HDM4-206ENST00000590454 MT3P25713 68 aa5.9□□□□□ -1.46
R3HDM4-206ENST00000590454 KRTAP5-1Q6L8H4 278 aa5.81□□□□□ -1.48
R3HDM4-206ENST00000590454 LUZP6Q538Z0 58 aa5.61□□□□□ -1.51
R3HDM4-206ENST00000590454 H3BS24 57 aa5.57□□□□□ -1.52
R3HDM4-206ENST00000590454 LCE1EQ5T753 118 aa5.34□□□□□ -1.55
R3HDM4-206ENST00000590454 LCE3DQ9BYE3 92 aa5.2□□□□□ -1.58
R3HDM4-206ENST00000590454 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
R3HDM4-206ENST00000590454 LCE1BQ5T7P3 118 aa5.08□□□□□ -1.6
R3HDM4-206ENST00000590454 NDUFAF8A1L188 74 aa5.04□□□□□ -1.6
R3HDM4-206ENST00000590454 LCE3EQ5T5B0 92 aa4.96□□□□□ -1.62
R3HDM4-206ENST00000590454 LCE1CQ5T751 118 aa4.95□□□□□ -1.62
R3HDM4-206ENST00000590454 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
R3HDM4-206ENST00000590454 A0A0A0MQY5 61 aa4.72□□□□□ -1.65
R3HDM4-206ENST00000590454 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
R3HDM4-206ENST00000590454 LCE1FQ5T754 118 aa4.59□□□□□ -1.67
R3HDM4-206ENST00000590454 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.53□□□□□ -1.68
R3HDM4-206ENST00000590454 PHGR1C9JFL3 82 aa4.46□□□□□ -1.7
R3HDM4-206ENST00000590454 KRTAP21-2Q3LI59 83 aa4.26□□□□□ -1.73
R3HDM4-206ENST00000590454 INE1O15225 51 aa4.03□□□□□ -1.76
R3HDM4-206ENST00000590454 PRM1P04553 51 aa4.03□□□□□ -1.76
R3HDM4-206ENST00000590454 KRTAP4-4Q9BYR3 166 aa3.88□□□□□ -1.79
R3HDM4-206ENST00000590454 MUC19Q7Z5P9 8384 aa3.78□□□□□ -1.81
R3HDM4-206ENST00000590454 KRTAP21-1Q3LI58 79 aa3.41□□□□□ -1.86
R3HDM4-206ENST00000590454 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 94 ms