RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 TNP1P09430 55 aa5.21□□□□□ -1.58
SCAMP4-212ENST00000590266 KRTAP19-5Q3LI72 72 aa5.2□□□□□ -1.58
SCAMP4-212ENST00000590266 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
SCAMP4-212ENST00000590266 KRTAP19-3Q7Z4W3 81 aa5.14□□□□□ -1.59
SCAMP4-212ENST00000590266 LCE5AQ5TCM9 118 aa5.11□□□□□ -1.59
SCAMP4-212ENST00000590266 DSTQ03001 7570 aaKnown RBP5.1□□□□□ -1.59
SCAMP4-212ENST00000590266 ROMO1P60602 79 aa5.05□□□□□ -1.6
SCAMP4-212ENST00000590266 MT1GP13640 62 aa5.01□□□□□ -1.61
SCAMP4-212ENST00000590266 KRTAP25-1Q3LHN0 102 aa5.01□□□□□ -1.61
SCAMP4-212ENST00000590266 MT1LQ93083 61 aa5.01□□□□□ -1.61
SCAMP4-212ENST00000590266 PP632Q6XCG6 107 aa5□□□□□ -1.61
SCAMP4-212ENST00000590266 PRO0628Q9UI54 55 aa4.97□□□□□ -1.61
SCAMP4-212ENST00000590266 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
SCAMP4-212ENST00000590266 MT1MQ8N339 61 aa4.95□□□□□ -1.62
SCAMP4-212ENST00000590266 PMAIP1Q13794 54 aa4.94□□□□□ -1.62
SCAMP4-212ENST00000590266 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
SCAMP4-212ENST00000590266 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
SCAMP4-212ENST00000590266 KRTAP23-1A1A580 65 aa4.84□□□□□ -1.63
SCAMP4-212ENST00000590266 KRTAP4-7Q9BYR0 210 aa4.81□□□□□ -1.64
SCAMP4-212ENST00000590266 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
SCAMP4-212ENST00000590266 MT4P47944 62 aa4.78□□□□□ -1.64
SCAMP4-212ENST00000590266 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
SCAMP4-212ENST00000590266 HMCN1Q96RW7 5635 aa4.74□□□□□ -1.65
SCAMP4-212ENST00000590266 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.66
SCAMP4-212ENST00000590266 PRAC1Q96KF2 57 aa4.65□□□□□ -1.67
SCAMP4-212ENST00000590266 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
SCAMP4-212ENST00000590266 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
SCAMP4-212ENST00000590266 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
SCAMP4-212ENST00000590266 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
SCAMP4-212ENST00000590266 KRTAP4-6Q9BYQ5 205 aa4.57□□□□□ -1.68
SCAMP4-212ENST00000590266 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
SCAMP4-212ENST00000590266 LOC100996750A0A140TA64 210 aa4.55□□□□□ -1.68
SCAMP4-212ENST00000590266 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
SCAMP4-212ENST00000590266 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
SCAMP4-212ENST00000590266 KRTAP5-7Q6L8G8 165 aa4.46□□□□□ -1.7
SCAMP4-212ENST00000590266 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
SCAMP4-212ENST00000590266 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
SCAMP4-212ENST00000590266 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
SCAMP4-212ENST00000590266 SVIPQ8NHG7 77 aa4.39□□□□□ -1.71
SCAMP4-212ENST00000590266 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
SCAMP4-212ENST00000590266 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
SCAMP4-212ENST00000590266 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
SCAMP4-212ENST00000590266 MT1AP04731 61 aa4.25□□□□□ -1.73
SCAMP4-212ENST00000590266 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
SCAMP4-212ENST00000590266 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
SCAMP4-212ENST00000590266 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
SCAMP4-212ENST00000590266 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
SCAMP4-212ENST00000590266 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
SCAMP4-212ENST00000590266 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
SCAMP4-212ENST00000590266 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
SCAMP4-212ENST00000590266 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
SCAMP4-212ENST00000590266 MT3P25713 68 aa3.89□□□□□ -1.79
SCAMP4-212ENST00000590266 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
SCAMP4-212ENST00000590266 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
SCAMP4-212ENST00000590266 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
SCAMP4-212ENST00000590266 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
SCAMP4-212ENST00000590266 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
SCAMP4-212ENST00000590266 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
SCAMP4-212ENST00000590266 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
SCAMP4-212ENST00000590266 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
SCAMP4-212ENST00000590266 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
SCAMP4-212ENST00000590266 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
SCAMP4-212ENST00000590266 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
SCAMP4-212ENST00000590266 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
SCAMP4-212ENST00000590266 A0A0A0MQY5 61 aa3.06□□□□□ -1.92
SCAMP4-212ENST00000590266 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
SCAMP4-212ENST00000590266 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
SCAMP4-212ENST00000590266 INE1O15225 51 aa2.93□□□□□ -1.94
SCAMP4-212ENST00000590266 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
SCAMP4-212ENST00000590266 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
SCAMP4-212ENST00000590266 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
SCAMP4-212ENST00000590266 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
SCAMP4-212ENST00000590266 H3BS24 57 aa2.61□□□□□ -1.99
SCAMP4-212ENST00000590266 PRM1P04553 51 aa2.61□□□□□ -1.99
SCAMP4-212ENST00000590266 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
SCAMP4-212ENST00000590266 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.02
SCAMP4-212ENST00000590266 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
SCAMP4-212ENST00000590266 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms