RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 SPRR2EP22531 72 aa3.37□□□□□ -1.87
DNMT1-219ENST00000589349 SPRR2BP35325 72 aa3.37□□□□□ -1.87
DNMT1-219ENST00000589349 SPRR2AP35326 72 aa3.37□□□□□ -1.87
DNMT1-219ENST00000589349 RPS28P62857 69 aaKnown RBP3.36□□□□□ -1.87
DNMT1-219ENST00000589349 SERP2Q8N6R1 65 aa3.34□□□□□ -1.87
DNMT1-219ENST00000589349 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
DNMT1-219ENST00000589349 CAMK2N1Q7Z7J9 78 aa3.33□□□□□ -1.88
DNMT1-219ENST00000589349 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
DNMT1-219ENST00000589349 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
DNMT1-219ENST00000589349 SPANXA2-OT1Q8N9U9 137 aa3.32□□□□□ -1.88
DNMT1-219ENST00000589349 MDN1Q9NU22 5596 aa3.32□□□□□ -1.88
DNMT1-219ENST00000589349 SERP1Q9Y6X1 66 aa3.3□□□□□ -1.88
DNMT1-219ENST00000589349 A0A0D9SG42 100 aa3.28□□□□□ -1.88
DNMT1-219ENST00000589349 COA5Q86WW8 74 aa3.28□□□□□ -1.88
DNMT1-219ENST00000589349 COX7CP15954 63 aa3.26□□□□□ -1.89
DNMT1-219ENST00000589349 TMEM258P61165 79 aa3.26□□□□□ -1.89
DNMT1-219ENST00000589349 SPRR2DP22532 72 aa3.25□□□□□ -1.89
DNMT1-219ENST00000589349 KRTAP13-4Q3LI77 160 aa3.23□□□□□ -1.89
DNMT1-219ENST00000589349 SPINT4Q6UDR6 99 aa3.23□□□□□ -1.89
DNMT1-219ENST00000589349 PRO0628Q9UI54 55 aa3.22□□□□□ -1.89
DNMT1-219ENST00000589349 SPATA8Q6RVD6 105 aa3.21□□□□□ -1.9
DNMT1-219ENST00000589349 SPRR5A0A1B0GTR4 108 aa3.2□□□□□ -1.9
DNMT1-219ENST00000589349 A0A1B0GU33 70 aa3.2□□□□□ -1.9
DNMT1-219ENST00000589349 A0A1B0GU69 56 aa3.17□□□□□ -1.9
DNMT1-219ENST00000589349 SMIM26A0A096LP01 95 aa3.15□□□□□ -1.91
DNMT1-219ENST00000589349 H7BZZ5 65 aa3.15□□□□□ -1.91
DNMT1-219ENST00000589349 V9GYY9 64 aa3.15□□□□□ -1.91
DNMT1-219ENST00000589349 CYSTM1Q9H1C7 97 aa3.14□□□□□ -1.91
DNMT1-219ENST00000589349 ATP5EP56381 51 aaPredicted RBP3.12□□□□□ -1.91
DNMT1-219ENST00000589349 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
DNMT1-219ENST00000589349 DSTQ03001 7570 aaKnown RBP3.1□□□□□ -1.91
DNMT1-219ENST00000589349 PRR15LQ9BU68 103 aa3.09□□□□□ -1.91
DNMT1-219ENST00000589349 KRTAP12-1P59990 96 aa3.08□□□□□ -1.92
DNMT1-219ENST00000589349 PMAIP1Q13794 54 aa3.04□□□□□ -1.92
DNMT1-219ENST00000589349 MT1EP04732 61 aa3.03□□□□□ -1.92
DNMT1-219ENST00000589349 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
DNMT1-219ENST00000589349 BRK1Q8WUW1 75 aa3.03□□□□□ -1.92
DNMT1-219ENST00000589349 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
DNMT1-219ENST00000589349 KRTAP19-7Q3SYF9 63 aa3.02□□□□□ -1.93
DNMT1-219ENST00000589349 TNP1P09430 55 aa3.01□□□□□ -1.93
DNMT1-219ENST00000589349 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
DNMT1-219ENST00000589349 KRTAP19-3Q7Z4W3 81 aa3.01□□□□□ -1.93
DNMT1-219ENST00000589349 Q1T7F1 81 aa2.98□□□□□ -1.93
DNMT1-219ENST00000589349 C10orf95Q9H7T3 257 aa2.95□□□□□ -1.94
DNMT1-219ENST00000589349 LINC01558Q9Y6Z2 57 aa2.95□□□□□ -1.94
DNMT1-219ENST00000589349 UQCR11O14957 56 aa2.94□□□□□ -1.94
DNMT1-219ENST00000589349 MT1GP13640 62 aa2.94□□□□□ -1.94
DNMT1-219ENST00000589349 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
DNMT1-219ENST00000589349 KTN1-AS1Q86SY8 53 aa2.92□□□□□ -1.94
DNMT1-219ENST00000589349 K7ERS5 55 aa2.9□□□□□ -1.95
DNMT1-219ENST00000589349 MIR22HGQ0VDD5 57 aa2.89□□□□□ -1.95
DNMT1-219ENST00000589349 MT1LQ93083 61 aa2.89□□□□□ -1.95
DNMT1-219ENST00000589349 MT1MQ8N339 61 aa2.88□□□□□ -1.95
DNMT1-219ENST00000589349 MT4P47944 62 aa2.87□□□□□ -1.95
DNMT1-219ENST00000589349 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
DNMT1-219ENST00000589349 PSPHP1O15172 72 aa2.85□□□□□ -1.95
DNMT1-219ENST00000589349 KRTAP12-3P60328 96 aa2.84□□□□□ -1.95
DNMT1-219ENST00000589349 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.96
DNMT1-219ENST00000589349 CDC42SE1Q9NRR8 79 aa2.82□□□□□ -1.96
DNMT1-219ENST00000589349 KRTAP25-1Q3LHN0 102 aa2.8□□□□□ -1.96
DNMT1-219ENST00000589349 A6NED7 52 aa2.77□□□□□ -1.97
DNMT1-219ENST00000589349 LUZP6Q538Z0 58 aa2.72□□□□□ -1.97
DNMT1-219ENST00000589349 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
DNMT1-219ENST00000589349 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
DNMT1-219ENST00000589349 KRTAP12-4P60329 112 aa2.64□□□□□ -1.99
DNMT1-219ENST00000589349 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
DNMT1-219ENST00000589349 ROMO1P60602 79 aa2.63□□□□□ -1.99
DNMT1-219ENST00000589349 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
DNMT1-219ENST00000589349 MT1AP04731 61 aa2.46□□□□□ -2.02
DNMT1-219ENST00000589349 SYNE1Q8NF91 8797 aaKnown RBP2.46□□□□□ -2.02
DNMT1-219ENST00000589349 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
DNMT1-219ENST00000589349 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
DNMT1-219ENST00000589349 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
DNMT1-219ENST00000589349 INE1O15225 51 aa1.99□□□□□ -2.09
DNMT1-219ENST00000589349 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
DNMT1-219ENST00000589349 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
DNMT1-219ENST00000589349 PRM1P04553 51 aa1.35□□□□□ -2.19
DNMT1-219ENST00000589349 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 72.9 ms