RNA–Protein interactions for RNA: ENST00000589070.1

SEPT9-222, Transcript of septin 9, human

TSL 3

Gene SEPT9, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-222	ENST00000589070	LCE3A	Q5TA76	89 aa		6.52	□□□□□ -1.37
SEPT9-222	ENST00000589070	PRR15L	Q9BU68	103 aa		6.5	□□□□□ -1.37
SEPT9-222	ENST00000589070	LCE1D	Q5T752	114 aa		6.49	□□□□□ -1.37
SEPT9-222	ENST00000589070	LCE4A	Q5TA78	99 aa		6.48	□□□□□ -1.37
SEPT9-222	ENST00000589070	GPR98	Q8WXG9	6306 aa		6.44	□□□□□ -1.38
SEPT9-222	ENST00000589070	LINC01558	Q9Y6Z2	57 aa		6.42	□□□□□ -1.38
SEPT9-222	ENST00000589070	MT4	P47944	62 aa		6.4	□□□□□ -1.38
SEPT9-222	ENST00000589070	KRTAP4-3	Q9BYR4	195 aa		6.4	□□□□□ -1.38
SEPT9-222	ENST00000589070	PSPHP1	O15172	72 aa		6.39	□□□□□ -1.39
SEPT9-222	ENST00000589070	KRTAP5-4	Q6L8H1	288 aa		6.32	□□□□□ -1.4
SEPT9-222	ENST00000589070	KRTAP12-3	P60328	96 aa		6.29	□□□□□ -1.4
SEPT9-222	ENST00000589070	UQCR11	O14957	56 aa		6.28	□□□□□ -1.4
SEPT9-222	ENST00000589070	HMCN1	Q96RW7	5635 aa		6.27	□□□□□ -1.41
SEPT9-222	ENST00000589070		A6NED7	52 aa		6.26	□□□□□ -1.41
SEPT9-222	ENST00000589070	BRK1	Q8WUW1	75 aa		6.24	□□□□□ -1.41
SEPT9-222	ENST00000589070	KRTAP4-7	Q9BYR0	210 aa		6.22	□□□□□ -1.41
SEPT9-222	ENST00000589070	KRTAP4-6	Q9BYQ5	205 aa		6.21	□□□□□ -1.42
SEPT9-222	ENST00000589070	PRO0628	Q9UI54	55 aa		6.14	□□□□□ -1.43
SEPT9-222	ENST00000589070	KRTAP25-1	Q3LHN0	102 aa		6.13	□□□□□ -1.43
SEPT9-222	ENST00000589070	CDC42SE1	Q9NRR8	79 aa		6.13	□□□□□ -1.43
SEPT9-222	ENST00000589070	MIR22HG	Q0VDD5	57 aa		6.12	□□□□□ -1.43
SEPT9-222	ENST00000589070	KRTAP5-10	Q6L8G5	202 aa		6.07	□□□□□ -1.44
SEPT9-222	ENST00000589070	AHNAK2	Q8IVF2	5795 aa		6.06	□□□□□ -1.44
SEPT9-222	ENST00000589070		K7ERS5	55 aa		6.05	□□□□□ -1.44
SEPT9-222	ENST00000589070	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.01	□□□□□ -1.45
SEPT9-222	ENST00000589070	KRTAP19-4	Q3LI73	84 aa		5.98	□□□□□ -1.45
SEPT9-222	ENST00000589070	KRTAP20-2	Q3LI61	65 aa		5.97	□□□□□ -1.45
SEPT9-222	ENST00000589070	SPRR5	A0A1B0GTR4	108 aa		5.95	□□□□□ -1.46
SEPT9-222	ENST00000589070	KRTAP12-4	P60329	112 aa		5.93	□□□□□ -1.46
SEPT9-222	ENST00000589070	KRTAP5-3	Q6L8H2	238 aa		5.92	□□□□□ -1.46
SEPT9-222	ENST00000589070	LOC100996750	A0A140TA64	210 aa		5.9	□□□□□ -1.46
SEPT9-222	ENST00000589070	KRTAP23-1	A1A580	65 aa		5.9	□□□□□ -1.46
SEPT9-222	ENST00000589070	PMAIP1	Q13794	54 aa		5.9	□□□□□ -1.46
SEPT9-222	ENST00000589070	KRTAP5-7	Q6L8G8	165 aa		5.86	□□□□□ -1.47
SEPT9-222	ENST00000589070	KRTAP15-1	Q3LI76	137 aa		5.85	□□□□□ -1.47
SEPT9-222	ENST00000589070	SVIP	Q8NHG7	77 aa		5.8	□□□□□ -1.48
SEPT9-222	ENST00000589070	LCE3C	Q5T5A8	94 aa		5.79	□□□□□ -1.48
SEPT9-222	ENST00000589070	SYNE1	Q8NF91	8797 aa	Known RBP	5.71	□□□□□ -1.5
SEPT9-222	ENST00000589070	KTN1-AS1	Q86SY8	53 aa		5.7	□□□□□ -1.5
SEPT9-222	ENST00000589070	ROMO1	P60602	79 aa		5.59	□□□□□ -1.51
SEPT9-222	ENST00000589070	MT1A	P04731	61 aa		5.58	□□□□□ -1.52
SEPT9-222	ENST00000589070	KRTAP6-1	Q3LI64	71 aa		5.55	□□□□□ -1.52
SEPT9-222	ENST00000589070	KRTAP5-2	Q701N4	177 aa		5.5	□□□□□ -1.53
SEPT9-222	ENST00000589070	KRTAP4-11	Q9BYQ6	195 aa		5.49	□□□□□ -1.53
SEPT9-222	ENST00000589070	PRAC1	Q96KF2	57 aa		5.45	□□□□□ -1.54
SEPT9-222	ENST00000589070	KRTAP9-6	A8MVA2	160 aa		5.43	□□□□□ -1.54
SEPT9-222	ENST00000589070	KRTAP9-4	Q9BYQ2	154 aa		5.43	□□□□□ -1.54
SEPT9-222	ENST00000589070	KRTAP6-2	Q3LI66	62 aa		5.33	□□□□□ -1.56
SEPT9-222	ENST00000589070	KRTAP5-8	O75690	187 aa		5.3	□□□□□ -1.56
SEPT9-222	ENST00000589070	OBSCN	Q5VST9	7968 aa		5.16	□□□□□ -1.58
SEPT9-222	ENST00000589070	MT3	P25713	68 aa		5.13	□□□□□ -1.59
SEPT9-222	ENST00000589070	KRTAP9-9	Q9BYP9	154 aa		5.07	□□□□□ -1.6
SEPT9-222	ENST00000589070	MUC5AC	P98088	5654 aa		5.02	□□□□□ -1.61
SEPT9-222	ENST00000589070	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.98	□□□□□ -1.61
SEPT9-222	ENST00000589070	AHNAK	Q09666	5890 aa	Known RBP	4.98	□□□□□ -1.61
SEPT9-222	ENST00000589070	KRTAP5-1	Q6L8H4	278 aa		4.96	□□□□□ -1.62
SEPT9-222	ENST00000589070	LCE1E	Q5T753	118 aa		4.74	□□□□□ -1.65
SEPT9-222	ENST00000589070	LUZP6	Q538Z0	58 aa		4.58	□□□□□ -1.68
SEPT9-222	ENST00000589070	LCE1B	Q5T7P3	118 aa		4.46	□□□□□ -1.7
SEPT9-222	ENST00000589070	KRTAP4-2	Q9BYR5	136 aa		4.46	□□□□□ -1.7
SEPT9-222	ENST00000589070	NDUFAF8	A1L188	74 aa		4.43	□□□□□ -1.7
SEPT9-222	ENST00000589070	LCE1C	Q5T751	118 aa		4.4	□□□□□ -1.71
SEPT9-222	ENST00000589070	LCE3D	Q9BYE3	92 aa		4.16	□□□□□ -1.74
SEPT9-222	ENST00000589070	KRTAP4-12	Q9BQ66	201 aa		4.09	□□□□□ -1.75
SEPT9-222	ENST00000589070		H3BS24	57 aa		4.06	□□□□□ -1.76
SEPT9-222	ENST00000589070		A0A0A0MQY5	61 aa		4.02	□□□□□ -1.77
SEPT9-222	ENST00000589070	KRTAP5-11	Q6L8G4	156 aa		3.97	□□□□□ -1.77
SEPT9-222	ENST00000589070	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.97	□□□□□ -1.77
SEPT9-222	ENST00000589070	LCE1F	Q5T754	118 aa		3.92	□□□□□ -1.78
SEPT9-222	ENST00000589070	LCE3E	Q5T5B0	92 aa		3.89	□□□□□ -1.79
SEPT9-222	ENST00000589070	INE1	O15225	51 aa		3.72	□□□□□ -1.81
SEPT9-222	ENST00000589070	KRTAP21-2	Q3LI59	83 aa		3.66	□□□□□ -1.82
SEPT9-222	ENST00000589070	PHGR1	C9JFL3	82 aa		3.55	□□□□□ -1.84
SEPT9-222	ENST00000589070	KRTAP4-4	Q9BYR3	166 aa		3.36	□□□□□ -1.87
SEPT9-222	ENST00000589070	MUC19	Q7Z5P9	8384 aa		3.18	□□□□□ -1.9
SEPT9-222	ENST00000589070	PRM1	P04553	51 aa		2.9	□□□□□ -1.95
SEPT9-222	ENST00000589070	KRTAP21-1	Q3LI58	79 aa		2.7	□□□□□ -1.98
SEPT9-222	ENST00000589070	MUC16	Q8WXI7	14507 aa		2.28	□□□□□ -2.04

Retrieved 78 of 20,778 RNA–protein pairs in 280.3 ms