RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 PRO2289Q9P1D8 64 aa3.32□□□□□ -1.88
ATG4D-210ENST00000588972 BRK1Q8WUW1 75 aa3.31□□□□□ -1.88
ATG4D-210ENST00000588972 H0YAA0 97 aa3.3□□□□□ -1.88
ATG4D-210ENST00000588972 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
ATG4D-210ENST00000588972 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
ATG4D-210ENST00000588972 PRR15LQ9BU68 103 aa3.29□□□□□ -1.88
ATG4D-210ENST00000588972 SPRR2GQ9BYE4 73 aa3.29□□□□□ -1.88
ATG4D-210ENST00000588972 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
ATG4D-210ENST00000588972 MT1BP07438 61 aa3.27□□□□□ -1.89
ATG4D-210ENST00000588972 LINC01558Q9Y6Z2 57 aa3.27□□□□□ -1.89
ATG4D-210ENST00000588972 Q5VV11 94 aa3.26□□□□□ -1.89
ATG4D-210ENST00000588972 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
ATG4D-210ENST00000588972 KRTAP19-8Q3LI54 63 aa3.25□□□□□ -1.89
ATG4D-210ENST00000588972 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
ATG4D-210ENST00000588972 CRIPTQ9P021 101 aa3.24□□□□□ -1.89
ATG4D-210ENST00000588972 A0A1B0GU69 56 aa3.22□□□□□ -1.89
ATG4D-210ENST00000588972 LINC01554Q52M75 96 aa3.22□□□□□ -1.89
ATG4D-210ENST00000588972 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
ATG4D-210ENST00000588972 CDC42SE1Q9NRR8 79 aa3.21□□□□□ -1.9
ATG4D-210ENST00000588972 M0QZ58 72 aa3.18□□□□□ -1.9
ATG4D-210ENST00000588972 SPRR2EP22531 72 aa3.18□□□□□ -1.9
ATG4D-210ENST00000588972 SPRR2BP35325 72 aa3.18□□□□□ -1.9
ATG4D-210ENST00000588972 SPRR2AP35326 72 aa3.18□□□□□ -1.9
ATG4D-210ENST00000588972 SPRR2FQ96RM1 72 aa3.17□□□□□ -1.9
ATG4D-210ENST00000588972 KRTAP2-1Q9BYU5 128 aa3.16□□□□□ -1.9
ATG4D-210ENST00000588972 UQCR11O14957 56 aa3.14□□□□□ -1.91
ATG4D-210ENST00000588972 PLAC4Q8WY50 150 aa3.11□□□□□ -1.91
ATG4D-210ENST00000588972 MIR22HGQ0VDD5 57 aa3.1□□□□□ -1.91
ATG4D-210ENST00000588972 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
ATG4D-210ENST00000588972 MT1XP80297 61 aa3.09□□□□□ -1.91
ATG4D-210ENST00000588972 KRTAP13-4Q3LI77 160 aa3.09□□□□□ -1.91
ATG4D-210ENST00000588972 SPATA8Q6RVD6 105 aa3.09□□□□□ -1.91
ATG4D-210ENST00000588972 SPRR2DP22532 72 aa3.08□□□□□ -1.92
ATG4D-210ENST00000588972 KRTAP8-1Q8IUC2 63 aa3.07□□□□□ -1.92
ATG4D-210ENST00000588972 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
ATG4D-210ENST00000588972 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
ATG4D-210ENST00000588972 A0A0D9SG42 100 aa3.01□□□□□ -1.93
ATG4D-210ENST00000588972 KRTAP12-1P59990 96 aa2.97□□□□□ -1.93
ATG4D-210ENST00000588972 KRTAP12-3P60328 96 aa2.91□□□□□ -1.94
ATG4D-210ENST00000588972 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
ATG4D-210ENST00000588972 ROMO1P60602 79 aa2.84□□□□□ -1.95
ATG4D-210ENST00000588972 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
ATG4D-210ENST00000588972 C10orf95Q9H7T3 257 aa2.8□□□□□ -1.96
ATG4D-210ENST00000588972 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
ATG4D-210ENST00000588972 TNP1P09430 55 aa2.78□□□□□ -1.96
ATG4D-210ENST00000588972 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
ATG4D-210ENST00000588972 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
ATG4D-210ENST00000588972 KRTAP19-7Q3SYF9 63 aa2.76□□□□□ -1.97
ATG4D-210ENST00000588972 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
ATG4D-210ENST00000588972 MT1EP04732 61 aa2.73□□□□□ -1.97
ATG4D-210ENST00000588972 KRTAP19-5Q3LI72 72 aa2.72□□□□□ -1.97
ATG4D-210ENST00000588972 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
ATG4D-210ENST00000588972 MT4P47944 62 aa2.71□□□□□ -1.98
ATG4D-210ENST00000588972 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
ATG4D-210ENST00000588972 KRTAP12-4P60329 112 aa2.7□□□□□ -1.98
ATG4D-210ENST00000588972 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
ATG4D-210ENST00000588972 KRTAP5-7Q6L8G8 165 aa2.65□□□□□ -1.99
ATG4D-210ENST00000588972 MT1LQ93083 61 aa2.63□□□□□ -1.99
ATG4D-210ENST00000588972 KRTAP4-3Q9BYR4 195 aa2.62□□□□□ -1.99
ATG4D-210ENST00000588972 MT1GP13640 62 aa2.61□□□□□ -1.99
ATG4D-210ENST00000588972 MT1MQ8N339 61 aa2.59□□□□□ -1.99
ATG4D-210ENST00000588972 INE1O15225 51 aa2.55□□□□□ -2
ATG4D-210ENST00000588972 KRTAP20-2Q3LI61 65 aa2.48□□□□□ -2.01
ATG4D-210ENST00000588972 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
ATG4D-210ENST00000588972 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
ATG4D-210ENST00000588972 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
ATG4D-210ENST00000588972 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
ATG4D-210ENST00000588972 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
ATG4D-210ENST00000588972 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
ATG4D-210ENST00000588972 KRTAP6-1Q3LI64 71 aa2.23□□□□□ -2.05
ATG4D-210ENST00000588972 MT1AP04731 61 aa2.22□□□□□ -2.05
ATG4D-210ENST00000588972 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
ATG4D-210ENST00000588972 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
ATG4D-210ENST00000588972 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
ATG4D-210ENST00000588972 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
ATG4D-210ENST00000588972 PRM1P04553 51 aa1.46□□□□□ -2.18
ATG4D-210ENST00000588972 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
ATG4D-210ENST00000588972 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 123.1 ms