RNA–Protein interactions for RNA: ENST00000588750.5

APOC1-202, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-202ENST00000588750 SPRR2FQ96RM1 72 aa3.22□□□□□ -1.89
APOC1-202ENST00000588750 TNP1P09430 55 aa3.21□□□□□ -1.9
APOC1-202ENST00000588750 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
APOC1-202ENST00000588750 NEBP20929 6669 aa3.18□□□□□ -1.9
APOC1-202ENST00000588750 PRAC1Q96KF2 57 aa3.16□□□□□ -1.9
APOC1-202ENST00000588750 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.91
APOC1-202ENST00000588750 MUC12Q9UKN1 5478 aa3.15□□□□□ -1.91
APOC1-202ENST00000588750 SPRR2EP22531 72 aa3.13□□□□□ -1.91
APOC1-202ENST00000588750 SPRR2BP35325 72 aa3.13□□□□□ -1.91
APOC1-202ENST00000588750 SPRR2AP35326 72 aa3.13□□□□□ -1.91
APOC1-202ENST00000588750 KRTAP25-1Q3LHN0 102 aa3.11□□□□□ -1.91
APOC1-202ENST00000588750 KMT2DO14686 5537 aa3.11□□□□□ -1.91
APOC1-202ENST00000588750 LCE1AQ5T7P2 110 aa3.07□□□□□ -1.92
APOC1-202ENST00000588750 MDN1Q9NU22 5596 aa3.07□□□□□ -1.92
APOC1-202ENST00000588750 ROMO1P60602 79 aa3.06□□□□□ -1.92
APOC1-202ENST00000588750 KRTAP20-1Q3LI63 56 aa3.04□□□□□ -1.92
APOC1-202ENST00000588750 SPRR2DP22532 72 aa3.03□□□□□ -1.92
APOC1-202ENST00000588750 KRTAP19-7Q3SYF9 63 aa3.03□□□□□ -1.92
APOC1-202ENST00000588750 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
APOC1-202ENST00000588750 MT1EP04732 61 aa3.02□□□□□ -1.93
APOC1-202ENST00000588750 KRTAP2-3P0C7H8 128 aa3.02□□□□□ -1.93
APOC1-202ENST00000588750 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
APOC1-202ENST00000588750 KRTAP2-4Q9BYR9 128 aa3.02□□□□□ -1.93
APOC1-202ENST00000588750 PP632Q6XCG6 107 aa3□□□□□ -1.93
APOC1-202ENST00000588750 KRTAP19-3Q7Z4W3 81 aa2.99□□□□□ -1.93
APOC1-202ENST00000588750 MT1GP13640 62 aa2.97□□□□□ -1.93
APOC1-202ENST00000588750 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
APOC1-202ENST00000588750 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
APOC1-202ENST00000588750 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
APOC1-202ENST00000588750 MT1LQ93083 61 aa2.91□□□□□ -1.94
APOC1-202ENST00000588750 MT1MQ8N339 61 aa2.86□□□□□ -1.95
APOC1-202ENST00000588750 NDUFAF8A1L188 74 aa2.77□□□□□ -1.97
APOC1-202ENST00000588750 LCE3CQ5T5A8 94 aa2.74□□□□□ -1.97
APOC1-202ENST00000588750 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
APOC1-202ENST00000588750 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
APOC1-202ENST00000588750 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
APOC1-202ENST00000588750 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
APOC1-202ENST00000588750 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
APOC1-202ENST00000588750 MT3P25713 68 aa2.63□□□□□ -1.99
APOC1-202ENST00000588750 MT4P47944 62 aa2.6□□□□□ -1.99
APOC1-202ENST00000588750 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
APOC1-202ENST00000588750 KRTAP12-4P60329 112 aa2.59□□□□□ -1.99
APOC1-202ENST00000588750 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
APOC1-202ENST00000588750 SPRR5A0A1B0GTR4 108 aa2.54□□□□□ -2
APOC1-202ENST00000588750 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
APOC1-202ENST00000588750 MT1AP04731 61 aa2.51□□□□□ -2.01
APOC1-202ENST00000588750 KRTAP9-6A8MVA2 160 aa2.5□□□□□ -2.01
APOC1-202ENST00000588750 KRTAP20-2Q3LI61 65 aa2.48□□□□□ -2.01
APOC1-202ENST00000588750 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
APOC1-202ENST00000588750 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
APOC1-202ENST00000588750 KRTAP5-10Q6L8G5 202 aa2.41□□□□□ -2.02
APOC1-202ENST00000588750 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
APOC1-202ENST00000588750 INE1O15225 51 aa2.35□□□□□ -2.03
APOC1-202ENST00000588750 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
APOC1-202ENST00000588750 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
APOC1-202ENST00000588750 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
APOC1-202ENST00000588750 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
APOC1-202ENST00000588750 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
APOC1-202ENST00000588750 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
APOC1-202ENST00000588750 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
APOC1-202ENST00000588750 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
APOC1-202ENST00000588750 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
APOC1-202ENST00000588750 OBSCNQ5VST9 7968 aa2.03□□□□□ -2.08
APOC1-202ENST00000588750 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.08
APOC1-202ENST00000588750 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
APOC1-202ENST00000588750 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
APOC1-202ENST00000588750 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
APOC1-202ENST00000588750 LCE3EQ5T5B0 92 aa1.98□□□□□ -2.09
APOC1-202ENST00000588750 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
APOC1-202ENST00000588750 LCE1BQ5T7P3 118 aa1.93□□□□□ -2.1
APOC1-202ENST00000588750 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
APOC1-202ENST00000588750 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
APOC1-202ENST00000588750 PRM1P04553 51 aa1.59□□□□□ -2.15
APOC1-202ENST00000588750 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
APOC1-202ENST00000588750 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
APOC1-202ENST00000588750 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
APOC1-202ENST00000588750 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 119.9 ms