RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 RPS28P62857 69 aaKnown RBP4.78□□□□□ -1.64
HDAC5-208ENST00000588419 ATP5EP56381 51 aaPredicted RBP4.76□□□□□ -1.65
HDAC5-208ENST00000588419 A8MU10 97 aa4.75□□□□□ -1.65
HDAC5-208ENST00000588419 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
HDAC5-208ENST00000588419 SMIM26A0A096LP01 95 aa4.74□□□□□ -1.65
HDAC5-208ENST00000588419 KRTAP5-4Q6L8H1 288 aa4.73□□□□□ -1.65
HDAC5-208ENST00000588419 A0A1B0GU69 56 aa4.72□□□□□ -1.65
HDAC5-208ENST00000588419 TNP1P09430 55 aa4.72□□□□□ -1.65
HDAC5-208ENST00000588419 KRTAP5-10Q6L8G5 202 aa4.71□□□□□ -1.66
HDAC5-208ENST00000588419 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
HDAC5-208ENST00000588419 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
HDAC5-208ENST00000588419 KRTAP5-7Q6L8G8 165 aa4.57□□□□□ -1.68
HDAC5-208ENST00000588419 KRTAP5-3Q6L8H2 238 aa4.57□□□□□ -1.68
HDAC5-208ENST00000588419 KRTAP20-2Q3LI61 65 aa4.53□□□□□ -1.68
HDAC5-208ENST00000588419 PRR15LQ9BU68 103 aa4.51□□□□□ -1.69
HDAC5-208ENST00000588419 Q1T7F1 81 aa4.47□□□□□ -1.69
HDAC5-208ENST00000588419 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
HDAC5-208ENST00000588419 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
HDAC5-208ENST00000588419 V9GYY9 64 aa4.45□□□□□ -1.7
HDAC5-208ENST00000588419 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
HDAC5-208ENST00000588419 LOC100996750A0A140TA64 210 aa4.43□□□□□ -1.7
HDAC5-208ENST00000588419 SVIPQ8NHG7 77 aa4.39□□□□□ -1.71
HDAC5-208ENST00000588419 LINC01558Q9Y6Z2 57 aa4.36□□□□□ -1.71
HDAC5-208ENST00000588419 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
HDAC5-208ENST00000588419 UQCR11O14957 56 aa4.33□□□□□ -1.72
HDAC5-208ENST00000588419 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
HDAC5-208ENST00000588419 PRO0628Q9UI54 55 aa4.3□□□□□ -1.72
HDAC5-208ENST00000588419 PSPHP1O15172 72 aa4.26□□□□□ -1.73
HDAC5-208ENST00000588419 AHNAKQ09666 5890 aaKnown RBP4.23□□□□□ -1.73
HDAC5-208ENST00000588419 MIR22HGQ0VDD5 57 aa4.23□□□□□ -1.73
HDAC5-208ENST00000588419 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
HDAC5-208ENST00000588419 K7ERS5 55 aa4.21□□□□□ -1.74
HDAC5-208ENST00000588419 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
HDAC5-208ENST00000588419 CDC42SE1Q9NRR8 79 aa4.19□□□□□ -1.74
HDAC5-208ENST00000588419 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
HDAC5-208ENST00000588419 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
HDAC5-208ENST00000588419 KRTAP19-4Q3LI73 84 aa4.16□□□□□ -1.74
HDAC5-208ENST00000588419 A6NED7 52 aa4.15□□□□□ -1.75
HDAC5-208ENST00000588419 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
HDAC5-208ENST00000588419 MT1AP04731 61 aa4.12□□□□□ -1.75
HDAC5-208ENST00000588419 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
HDAC5-208ENST00000588419 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
HDAC5-208ENST00000588419 MUC5BQ9HC84 5762 aaPredicted RBP4.09□□□□□ -1.75
HDAC5-208ENST00000588419 KRTAP23-1A1A580 65 aa4.07□□□□□ -1.76
HDAC5-208ENST00000588419 KRTAP5-8O75690 187 aa4.04□□□□□ -1.76
HDAC5-208ENST00000588419 PMAIP1Q13794 54 aa4.01□□□□□ -1.77
HDAC5-208ENST00000588419 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
HDAC5-208ENST00000588419 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
HDAC5-208ENST00000588419 KTN1-AS1Q86SY8 53 aa3.95□□□□□ -1.78
HDAC5-208ENST00000588419 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
HDAC5-208ENST00000588419 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
HDAC5-208ENST00000588419 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.79
HDAC5-208ENST00000588419 ROMO1P60602 79 aa3.85□□□□□ -1.79
HDAC5-208ENST00000588419 MT3P25713 68 aa3.78□□□□□ -1.8
HDAC5-208ENST00000588419 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
HDAC5-208ENST00000588419 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
HDAC5-208ENST00000588419 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
HDAC5-208ENST00000588419 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
HDAC5-208ENST00000588419 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
HDAC5-208ENST00000588419 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
HDAC5-208ENST00000588419 KRTAP4-12Q9BQ66 201 aa3.18□□□□□ -1.9
HDAC5-208ENST00000588419 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
HDAC5-208ENST00000588419 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
HDAC5-208ENST00000588419 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
HDAC5-208ENST00000588419 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
HDAC5-208ENST00000588419 H3BS24 57 aa2.92□□□□□ -1.94
HDAC5-208ENST00000588419 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
HDAC5-208ENST00000588419 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
HDAC5-208ENST00000588419 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
HDAC5-208ENST00000588419 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
HDAC5-208ENST00000588419 A0A0A0MQY5 61 aa2.75□□□□□ -1.97
HDAC5-208ENST00000588419 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
HDAC5-208ENST00000588419 INE1O15225 51 aa2.61□□□□□ -1.99
HDAC5-208ENST00000588419 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
HDAC5-208ENST00000588419 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
HDAC5-208ENST00000588419 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
HDAC5-208ENST00000588419 PRM1P04553 51 aa1.99□□□□□ -2.09
HDAC5-208ENST00000588419 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 69.9 ms