RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 SMIM26A0A096LP01 95 aa5.76□□□□□ -1.49
LINC01842-201ENST00000588275 A8MU10 97 aa5.75□□□□□ -1.49
LINC01842-201ENST00000588275 TNP1P09430 55 aa5.75□□□□□ -1.49
LINC01842-201ENST00000588275 A0A1B0GU69 56 aa5.7□□□□□ -1.5
LINC01842-201ENST00000588275 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
LINC01842-201ENST00000588275 KRTAP5-3Q6L8H2 238 aa5.65□□□□□ -1.5
LINC01842-201ENST00000588275 KRTAP5-7Q6L8G8 165 aa5.63□□□□□ -1.51
LINC01842-201ENST00000588275 H7BZZ5 65 aa5.61□□□□□ -1.51
LINC01842-201ENST00000588275 KRTAP12-3P60328 96 aa5.59□□□□□ -1.51
LINC01842-201ENST00000588275 TMEM258P61165 79 aa5.58□□□□□ -1.52
LINC01842-201ENST00000588275 KRTAP20-2Q3LI61 65 aa5.58□□□□□ -1.52
LINC01842-201ENST00000588275 ATP5EP56381 51 aaPredicted RBP5.5□□□□□ -1.53
LINC01842-201ENST00000588275 KRTAP5-5Q701N2 237 aaPredicted RBP5.49□□□□□ -1.53
LINC01842-201ENST00000588275 SPRR5A0A1B0GTR4 108 aa5.48□□□□□ -1.53
LINC01842-201ENST00000588275 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
LINC01842-201ENST00000588275 PRR15LQ9BU68 103 aa5.43□□□□□ -1.54
LINC01842-201ENST00000588275 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.54
LINC01842-201ENST00000588275 RPS28P62857 69 aaKnown RBP5.39□□□□□ -1.55
LINC01842-201ENST00000588275 SYNE1Q8NF91 8797 aaKnown RBP5.39□□□□□ -1.55
LINC01842-201ENST00000588275 LINC01558Q9Y6Z2 57 aa5.27□□□□□ -1.57
LINC01842-201ENST00000588275 KRTAP25-1Q3LHN0 102 aa5.25□□□□□ -1.57
LINC01842-201ENST00000588275 UQCR11O14957 56 aa5.23□□□□□ -1.57
LINC01842-201ENST00000588275 Q1T7F1 81 aa5.16□□□□□ -1.58
LINC01842-201ENST00000588275 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
LINC01842-201ENST00000588275 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
LINC01842-201ENST00000588275 V9GYY9 64 aa5.15□□□□□ -1.59
LINC01842-201ENST00000588275 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
LINC01842-201ENST00000588275 MIR22HGQ0VDD5 57 aa5.1□□□□□ -1.59
LINC01842-201ENST00000588275 LCE3CQ5T5A8 94 aa5.1□□□□□ -1.59
LINC01842-201ENST00000588275 K7ERS5 55 aa5.08□□□□□ -1.6
LINC01842-201ENST00000588275 KRTAP5-2Q701N4 177 aa5.07□□□□□ -1.6
LINC01842-201ENST00000588275 PSPHP1O15172 72 aa5.06□□□□□ -1.6
LINC01842-201ENST00000588275 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
LINC01842-201ENST00000588275 MT1AP04731 61 aa5.05□□□□□ -1.6
LINC01842-201ENST00000588275 KRTAP23-1A1A580 65 aa4.98□□□□□ -1.61
LINC01842-201ENST00000588275 KRTAP5-8O75690 187 aa4.98□□□□□ -1.61
LINC01842-201ENST00000588275 AHNAKQ09666 5890 aaKnown RBP4.97□□□□□ -1.61
LINC01842-201ENST00000588275 MUC5BQ9HC84 5762 aaPredicted RBP4.94□□□□□ -1.62
LINC01842-201ENST00000588275 MUC5ACP98088 5654 aa4.92□□□□□ -1.62
LINC01842-201ENST00000588275 A6NED7 52 aa4.91□□□□□ -1.62
LINC01842-201ENST00000588275 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
LINC01842-201ENST00000588275 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
LINC01842-201ENST00000588275 BRK1Q8WUW1 75 aa4.86□□□□□ -1.63
LINC01842-201ENST00000588275 OBSCNQ5VST9 7968 aa4.84□□□□□ -1.64
LINC01842-201ENST00000588275 CDC42SE1Q9NRR8 79 aa4.83□□□□□ -1.64
LINC01842-201ENST00000588275 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
LINC01842-201ENST00000588275 KRTAP9-9Q9BYP9 154 aa4.81□□□□□ -1.64
LINC01842-201ENST00000588275 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
LINC01842-201ENST00000588275 ROMO1P60602 79 aa4.65□□□□□ -1.67
LINC01842-201ENST00000588275 MT3P25713 68 aa4.64□□□□□ -1.67
LINC01842-201ENST00000588275 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
LINC01842-201ENST00000588275 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
LINC01842-201ENST00000588275 KTN1-AS1Q86SY8 53 aa4.4□□□□□ -1.71
LINC01842-201ENST00000588275 SVIPQ8NHG7 77 aa4.35□□□□□ -1.71
LINC01842-201ENST00000588275 PRAC1Q96KF2 57 aa4.29□□□□□ -1.72
LINC01842-201ENST00000588275 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
LINC01842-201ENST00000588275 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
LINC01842-201ENST00000588275 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
LINC01842-201ENST00000588275 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
LINC01842-201ENST00000588275 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
LINC01842-201ENST00000588275 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
LINC01842-201ENST00000588275 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
LINC01842-201ENST00000588275 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
LINC01842-201ENST00000588275 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
LINC01842-201ENST00000588275 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
LINC01842-201ENST00000588275 PHGR1C9JFL3 82 aa3.46□□□□□ -1.86
LINC01842-201ENST00000588275 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
LINC01842-201ENST00000588275 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
LINC01842-201ENST00000588275 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
LINC01842-201ENST00000588275 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
LINC01842-201ENST00000588275 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
LINC01842-201ENST00000588275 A0A0A0MQY5 61 aa3.01□□□□□ -1.93
LINC01842-201ENST00000588275 H3BS24 57 aa2.99□□□□□ -1.93
LINC01842-201ENST00000588275 INE1O15225 51 aa2.83□□□□□ -1.96
LINC01842-201ENST00000588275 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
LINC01842-201ENST00000588275 PRM1P04553 51 aa2.38□□□□□ -2.03
LINC01842-201ENST00000588275 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 7.5 ms