RNA–Protein interactions for RNA: ENST00000588087.5

TMC6-209, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 2,384 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-209ENST00000588087 FCGBPQ9Y6R7 5405 aaPredicted RBP7.23□□□□□ -1.25
TMC6-209ENST00000588087 KRTAP19-4Q3LI73 84 aa7.23□□□□□ -1.25
TMC6-209ENST00000588087 LCE2DQ5TA82 110 aaPredicted RBP7.22□□□□□ -1.25
TMC6-209ENST00000588087 KRTAP4-3Q9BYR4 195 aa7.19□□□□□ -1.26
TMC6-209ENST00000588087 MUC12Q9UKN1 5478 aa7.17□□□□□ -1.26
TMC6-209ENST00000588087 LOC100996750A0A140TA64 210 aa7.13□□□□□ -1.27
TMC6-209ENST00000588087 MT1GP13640 62 aa7.04□□□□□ -1.28
TMC6-209ENST00000588087 MT1MQ8N339 61 aa7.01□□□□□ -1.29
TMC6-209ENST00000588087 KRTAP19-3Q7Z4W3 81 aa6.99□□□□□ -1.29
TMC6-209ENST00000588087 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
TMC6-209ENST00000588087 MACF1Q9UPN3 7388 aaKnown RBP6.92□□□□□ -1.3
TMC6-209ENST00000588087 DSTQ03001 7570 aaKnown RBP6.84□□□□□ -1.31
TMC6-209ENST00000588087 SPRR2FQ96RM1 72 aa6.82□□□□□ -1.32
TMC6-209ENST00000588087 KRTAP9-2Q9BYQ4 174 aa6.79□□□□□ -1.32
TMC6-209ENST00000588087 LCE5AQ5TCM9 118 aa6.76□□□□□ -1.33
TMC6-209ENST00000588087 SYNE2Q8WXH0 6885 aaKnown RBP6.73□□□□□ -1.33
TMC6-209ENST00000588087 MDN1Q9NU22 5596 aa6.55□□□□□ -1.36
TMC6-209ENST00000588087 LCE3BQ5TA77 95 aa6.51□□□□□ -1.37
TMC6-209ENST00000588087 KRTAP12-4P60329 112 aa6.46□□□□□ -1.38
TMC6-209ENST00000588087 KRTAP5-9P26371 169 aa6.42□□□□□ -1.38
TMC6-209ENST00000588087 KRTAP4-9Q9BYQ8 210 aa6.41□□□□□ -1.38
TMC6-209ENST00000588087 KRTAP6-1Q3LI64 71 aa6.38□□□□□ -1.39
TMC6-209ENST00000588087 LCE1AQ5T7P2 110 aa6.37□□□□□ -1.39
TMC6-209ENST00000588087 SYNE1Q8NF91 8797 aaKnown RBP6.34□□□□□ -1.4
TMC6-209ENST00000588087 MT1AP04731 61 aa6.25□□□□□ -1.41
TMC6-209ENST00000588087 SPRR2EP22531 72 aa6.22□□□□□ -1.41
TMC6-209ENST00000588087 SPRR2BP35325 72 aa6.22□□□□□ -1.41
TMC6-209ENST00000588087 SPRR2AP35326 72 aa6.22□□□□□ -1.41
TMC6-209ENST00000588087 KRTAP5-5Q701N2 237 aaPredicted RBP6.17□□□□□ -1.42
TMC6-209ENST00000588087 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.09□□□□□ -1.43
TMC6-209ENST00000588087 KRTAP9-6A0A140TA67 174 aa6.07□□□□□ -1.44
TMC6-209ENST00000588087 LCE3DQ9BYE3 92 aa6.04□□□□□ -1.44
TMC6-209ENST00000588087 KRTAP6-3Q3LI67 103 aa6.02□□□□□ -1.45
TMC6-209ENST00000588087 SPRR2DP22532 72 aa5.96□□□□□ -1.46
TMC6-209ENST00000588087 LCE3EQ5T5B0 92 aa5.95□□□□□ -1.46
TMC6-209ENST00000588087 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
TMC6-209ENST00000588087 KRTAP9-7A8MTY7 169 aa5.85□□□□□ -1.47
TMC6-209ENST00000588087 KRTAP6-2Q3LI66 62 aa5.73□□□□□ -1.49
TMC6-209ENST00000588087 PRM1P04553 51 aa5.72□□□□□ -1.49
TMC6-209ENST00000588087 OBSCNQ5VST9 7968 aa5.72□□□□□ -1.49
TMC6-209ENST00000588087 NEBP20929 6669 aa5.68□□□□□ -1.5
TMC6-209ENST00000588087 MT3P25713 68 aa5.6□□□□□ -1.51
TMC6-209ENST00000588087 KRTAP5-4Q6L8H1 288 aa5.48□□□□□ -1.53
TMC6-209ENST00000588087 KRTAP4-6Q9BYQ5 205 aa5.33□□□□□ -1.56
TMC6-209ENST00000588087 MT4P47944 62 aa5.29□□□□□ -1.56
TMC6-209ENST00000588087 LCE4AQ5TA78 99 aa5.17□□□□□ -1.58
TMC6-209ENST00000588087 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
TMC6-209ENST00000588087 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
TMC6-209ENST00000588087 HMCN1Q96RW7 5635 aa5.11□□□□□ -1.59
TMC6-209ENST00000588087 KRTAP5-2Q701N4 177 aa5.06□□□□□ -1.6
TMC6-209ENST00000588087 LCE1DQ5T752 114 aa5.05□□□□□ -1.6
TMC6-209ENST00000588087 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
TMC6-209ENST00000588087 KRTAP20-1Q3LI63 56 aa4.92□□□□□ -1.62
TMC6-209ENST00000588087 MUC5ACP98088 5654 aa4.82□□□□□ -1.64
TMC6-209ENST00000588087 LCE1BQ5T7P3 118 aa4.63□□□□□ -1.67
TMC6-209ENST00000588087 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
TMC6-209ENST00000588087 KRTAP5-10Q6L8G5 202 aa4.43□□□□□ -1.7
TMC6-209ENST00000588087 KRTAP4-2Q9BYR5 136 aa4.39□□□□□ -1.71
TMC6-209ENST00000588087 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
TMC6-209ENST00000588087 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
TMC6-209ENST00000588087 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
TMC6-209ENST00000588087 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
TMC6-209ENST00000588087 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
TMC6-209ENST00000588087 KRTAP21-2Q3LI59 83 aa4.1□□□□□ -1.75
TMC6-209ENST00000588087 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
TMC6-209ENST00000588087 KRTAP5-7Q6L8G8 165 aa4.04□□□□□ -1.76
TMC6-209ENST00000588087 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
TMC6-209ENST00000588087 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
TMC6-209ENST00000588087 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
TMC6-209ENST00000588087 GPR98Q8WXG9 6306 aa3.74□□□□□ -1.81
TMC6-209ENST00000588087 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
TMC6-209ENST00000588087 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.83
TMC6-209ENST00000588087 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
TMC6-209ENST00000588087 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
TMC6-209ENST00000588087 KRTAP21-1Q3LI58 79 aa3.53□□□□□ -1.84
TMC6-209ENST00000588087 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
TMC6-209ENST00000588087 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
TMC6-209ENST00000588087 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 6.9 ms