RNA–Protein interactions for RNA: ENST00000588030.5

CIRBP-215, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CIRBP, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-215ENST00000588030 KRTAP19-7Q3SYF9 63 aa7.4□□□□□ -1.22
CIRBP-215ENST00000588030 TNP1P09430 55 aa7.36□□□□□ -1.23
CIRBP-215ENST00000588030 MT1EP04732 61 aa7.33□□□□□ -1.24
CIRBP-215ENST00000588030 PRAC1Q96KF2 57 aa7.33□□□□□ -1.24
CIRBP-215ENST00000588030 KRTAP19-5Q3LI72 72 aa7.32□□□□□ -1.24
CIRBP-215ENST00000588030 LCE5AQ5TCM9 118 aa7.28□□□□□ -1.24
CIRBP-215ENST00000588030 LCE3AQ5TA76 89 aa7.26□□□□□ -1.25
CIRBP-215ENST00000588030 KRTAP19-3Q7Z4W3 81 aa7.23□□□□□ -1.25
CIRBP-215ENST00000588030 KRTAP25-1Q3LHN0 102 aa7.22□□□□□ -1.25
CIRBP-215ENST00000588030 DSTQ03001 7570 aaKnown RBP7.2□□□□□ -1.26
CIRBP-215ENST00000588030 ROMO1P60602 79 aa7.18□□□□□ -1.26
CIRBP-215ENST00000588030 MT1GP13640 62 aa7.08□□□□□ -1.28
CIRBP-215ENST00000588030 MT1LQ93083 61 aa7.05□□□□□ -1.28
CIRBP-215ENST00000588030 PP632Q6XCG6 107 aa7.03□□□□□ -1.28
CIRBP-215ENST00000588030 MT1MQ8N339 61 aa6.97□□□□□ -1.29
CIRBP-215ENST00000588030 KRTAP12-3P60328 96 aa6.96□□□□□ -1.29
CIRBP-215ENST00000588030 KRTAP4-9Q9BYQ8 210 aa6.92□□□□□ -1.3
CIRBP-215ENST00000588030 KRTAP4-3Q9BYR4 195 aa6.86□□□□□ -1.31
CIRBP-215ENST00000588030 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
CIRBP-215ENST00000588030 GPR98Q8WXG9 6306 aa6.76□□□□□ -1.33
CIRBP-215ENST00000588030 LCE1DQ5T752 114 aa6.75□□□□□ -1.33
CIRBP-215ENST00000588030 LCE4AQ5TA78 99 aa6.74□□□□□ -1.33
CIRBP-215ENST00000588030 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.33
CIRBP-215ENST00000588030 MT4P47944 62 aa6.67□□□□□ -1.34
CIRBP-215ENST00000588030 KRTAP5-4Q6L8H1 288 aa6.65□□□□□ -1.35
CIRBP-215ENST00000588030 HMCN1Q96RW7 5635 aa6.64□□□□□ -1.35
CIRBP-215ENST00000588030 KRTAP15-1Q3LI76 137 aa6.58□□□□□ -1.36
CIRBP-215ENST00000588030 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.37
CIRBP-215ENST00000588030 KRTAP19-4Q3LI73 84 aa6.46□□□□□ -1.37
CIRBP-215ENST00000588030 LCE3CQ5T5A8 94 aa6.44□□□□□ -1.38
CIRBP-215ENST00000588030 AHNAK2Q8IVF2 5795 aa6.42□□□□□ -1.38
CIRBP-215ENST00000588030 LOC100996750A0A140TA64 210 aa6.41□□□□□ -1.38
CIRBP-215ENST00000588030 KRTAP5-5Q701N2 237 aaPredicted RBP6.39□□□□□ -1.39
CIRBP-215ENST00000588030 H3BS24 57 aa6.35□□□□□ -1.39
CIRBP-215ENST00000588030 KRTAP5-10Q6L8G5 202 aa6.27□□□□□ -1.41
CIRBP-215ENST00000588030 KRTAP20-2Q3LI61 65 aa6.25□□□□□ -1.41
CIRBP-215ENST00000588030 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
CIRBP-215ENST00000588030 SYNE1Q8NF91 8797 aaKnown RBP6.2□□□□□ -1.42
CIRBP-215ENST00000588030 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
CIRBP-215ENST00000588030 NDUFAF8A1L188 74 aa6.17□□□□□ -1.42
CIRBP-215ENST00000588030 KRTAP5-3Q6L8H2 238 aa6.14□□□□□ -1.43
CIRBP-215ENST00000588030 KRTAP9-6A8MVA2 160 aa6.06□□□□□ -1.44
CIRBP-215ENST00000588030 LUZP6Q538Z0 58 aa6.04□□□□□ -1.44
CIRBP-215ENST00000588030 KRTAP5-7Q6L8G8 165 aa6.02□□□□□ -1.45
CIRBP-215ENST00000588030 MT1AP04731 61 aa5.99□□□□□ -1.45
CIRBP-215ENST00000588030 KRTAP6-1Q3LI64 71 aa5.97□□□□□ -1.45
CIRBP-215ENST00000588030 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
CIRBP-215ENST00000588030 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
CIRBP-215ENST00000588030 A0A0A0MQY5 61 aa5.72□□□□□ -1.49
CIRBP-215ENST00000588030 KRTAP4-11Q9BYQ6 195 aa5.72□□□□□ -1.49
CIRBP-215ENST00000588030 KRTAP6-2Q3LI66 62 aa5.67□□□□□ -1.5
CIRBP-215ENST00000588030 KRTAP5-8O75690 187 aa5.53□□□□□ -1.52
CIRBP-215ENST00000588030 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
CIRBP-215ENST00000588030 MT3P25713 68 aa5.48□□□□□ -1.53
CIRBP-215ENST00000588030 INE1O15225 51 aa5.33□□□□□ -1.56
CIRBP-215ENST00000588030 MUC5BQ9HC84 5762 aaPredicted RBP5.28□□□□□ -1.56
CIRBP-215ENST00000588030 AHNAKQ09666 5890 aaKnown RBP5.27□□□□□ -1.57
CIRBP-215ENST00000588030 KRTAP5-1Q6L8H4 278 aa5.23□□□□□ -1.57
CIRBP-215ENST00000588030 KRTAP9-9Q9BYP9 154 aa5.22□□□□□ -1.57
CIRBP-215ENST00000588030 MUC5ACP98088 5654 aa5.21□□□□□ -1.58
CIRBP-215ENST00000588030 LCE1EQ5T753 118 aa4.99□□□□□ -1.61
CIRBP-215ENST00000588030 LCE1BQ5T7P3 118 aa4.73□□□□□ -1.65
CIRBP-215ENST00000588030 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
CIRBP-215ENST00000588030 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
CIRBP-215ENST00000588030 LCE1CQ5T751 118 aa4.63□□□□□ -1.67
CIRBP-215ENST00000588030 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
CIRBP-215ENST00000588030 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
CIRBP-215ENST00000588030 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
CIRBP-215ENST00000588030 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
CIRBP-215ENST00000588030 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
CIRBP-215ENST00000588030 KRTAP21-2Q3LI59 83 aa3.91□□□□□ -1.78
CIRBP-215ENST00000588030 PRM1P04553 51 aa3.7□□□□□ -1.82
CIRBP-215ENST00000588030 PHGR1C9JFL3 82 aa3.63□□□□□ -1.83
CIRBP-215ENST00000588030 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
CIRBP-215ENST00000588030 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
CIRBP-215ENST00000588030 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
CIRBP-215ENST00000588030 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms