RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 K7ERS5 55 aa8.5□□□□□ -1.05
LSM7-204ENST00000587502 TNP1P09430 55 aa8.5□□□□□ -1.05
LSM7-204ENST00000587502 KRTAP4-9Q9BYQ8 210 aa8.49□□□□□ -1.05
LSM7-204ENST00000587502 MT1GP13640 62 aa8.46□□□□□ -1.06
LSM7-204ENST00000587502 PP632Q6XCG6 107 aa8.43□□□□□ -1.06
LSM7-204ENST00000587502 LCE3AQ5TA76 89 aa8.37□□□□□ -1.07
LSM7-204ENST00000587502 MT1LQ93083 61 aa8.3□□□□□ -1.08
LSM7-204ENST00000587502 MT1MQ8N339 61 aa8.26□□□□□ -1.09
LSM7-204ENST00000587502 CDC42SE1Q9NRR8 79 aa8.25□□□□□ -1.09
LSM7-204ENST00000587502 KRTAP25-1Q3LHN0 102 aa8.19□□□□□ -1.1
LSM7-204ENST00000587502 LCE1DQ5T752 114 aa8.16□□□□□ -1.1
LSM7-204ENST00000587502 LCE4AQ5TA78 99 aa8.1□□□□□ -1.11
LSM7-204ENST00000587502 KRTAP5-10Q6L8G5 202 aa8.06□□□□□ -1.12
LSM7-204ENST00000587502 KRTAP12-3P60328 96 aa8.05□□□□□ -1.12
LSM7-204ENST00000587502 KRTAP4-3Q9BYR4 195 aa8.01□□□□□ -1.13
LSM7-204ENST00000587502 HMCN1Q96RW7 5635 aa7.99□□□□□ -1.13
LSM7-204ENST00000587502 ROMO1P60602 79 aa7.99□□□□□ -1.13
LSM7-204ENST00000587502 AHNAK2Q8IVF2 5795 aa7.97□□□□□ -1.13
LSM7-204ENST00000587502 MT4P47944 62 aa7.96□□□□□ -1.14
LSM7-204ENST00000587502 KRTAP23-1A1A580 65 aa7.93□□□□□ -1.14
LSM7-204ENST00000587502 KRTAP5-4Q6L8H1 288 aa7.91□□□□□ -1.14
LSM7-204ENST00000587502 KRTAP5-7Q6L8G8 165 aa7.88□□□□□ -1.15
LSM7-204ENST00000587502 KRTAP4-7Q9BYR0 210 aa7.83□□□□□ -1.16
LSM7-204ENST00000587502 BRK1Q8WUW1 75 aa7.82□□□□□ -1.16
LSM7-204ENST00000587502 KRTAP19-4Q3LI73 84 aa7.71□□□□□ -1.18
LSM7-204ENST00000587502 KRTAP4-6Q9BYQ5 205 aa7.7□□□□□ -1.18
LSM7-204ENST00000587502 SPRR5A0A1B0GTR4 108 aa7.66□□□□□ -1.18
LSM7-204ENST00000587502 KRTAP5-3Q6L8H2 238 aa7.66□□□□□ -1.18
LSM7-204ENST00000587502 KRTAP15-1Q3LI76 137 aa7.64□□□□□ -1.19
LSM7-204ENST00000587502 KRTAP5-5Q701N2 237 aaPredicted RBP7.58□□□□□ -1.2
LSM7-204ENST00000587502 KRTAP12-4P60329 112 aa7.47□□□□□ -1.21
LSM7-204ENST00000587502 KRTAP20-2Q3LI61 65 aa7.46□□□□□ -1.22
LSM7-204ENST00000587502 LCE3CQ5T5A8 94 aa7.45□□□□□ -1.22
LSM7-204ENST00000587502 LOC100996750A0A140TA64 210 aa7.42□□□□□ -1.22
LSM7-204ENST00000587502 PMAIP1Q13794 54 aa7.4□□□□□ -1.22
LSM7-204ENST00000587502 SVIPQ8NHG7 77 aa7.27□□□□□ -1.25
LSM7-204ENST00000587502 PRO0628Q9UI54 55 aa7.23□□□□□ -1.25
LSM7-204ENST00000587502 SYNE1Q8NF91 8797 aaKnown RBP7.19□□□□□ -1.26
LSM7-204ENST00000587502 MT1AP04731 61 aa7.07□□□□□ -1.28
LSM7-204ENST00000587502 KRTAP9-6A8MVA2 160 aa7.05□□□□□ -1.28
LSM7-204ENST00000587502 KRTAP6-1Q3LI64 71 aa7□□□□□ -1.29
LSM7-204ENST00000587502 PRAC1Q96KF2 57 aa6.97□□□□□ -1.29
LSM7-204ENST00000587502 KRTAP5-2Q701N4 177 aa6.92□□□□□ -1.3
LSM7-204ENST00000587502 KRTAP9-4Q9BYQ2 154 aa6.85□□□□□ -1.31
LSM7-204ENST00000587502 KRTAP4-11Q9BYQ6 195 aa6.83□□□□□ -1.32
LSM7-204ENST00000587502 KTN1-AS1Q86SY8 53 aa6.8□□□□□ -1.32
LSM7-204ENST00000587502 AHNAKQ09666 5890 aaKnown RBP6.79□□□□□ -1.32
LSM7-204ENST00000587502 MUC5ACP98088 5654 aa6.76□□□□□ -1.33
LSM7-204ENST00000587502 KRTAP6-2Q3LI66 62 aa6.7□□□□□ -1.34
LSM7-204ENST00000587502 MUC5BQ9HC84 5762 aaPredicted RBP6.69□□□□□ -1.34
LSM7-204ENST00000587502 KRTAP5-8O75690 187 aa6.67□□□□□ -1.34
LSM7-204ENST00000587502 MT3P25713 68 aa6.51□□□□□ -1.37
LSM7-204ENST00000587502 KRTAP9-9Q9BYP9 154 aa6.46□□□□□ -1.38
LSM7-204ENST00000587502 OBSCNQ5VST9 7968 aa6.38□□□□□ -1.39
LSM7-204ENST00000587502 KRTAP5-1Q6L8H4 278 aa6.2□□□□□ -1.42
LSM7-204ENST00000587502 LCE1EQ5T753 118 aa5.99□□□□□ -1.45
LSM7-204ENST00000587502 LUZP6Q538Z0 58 aa5.88□□□□□ -1.47
LSM7-204ENST00000587502 LCE1BQ5T7P3 118 aa5.59□□□□□ -1.51
LSM7-204ENST00000587502 KRTAP4-2Q9BYR5 136 aa5.59□□□□□ -1.51
LSM7-204ENST00000587502 LCE1CQ5T751 118 aa5.55□□□□□ -1.52
LSM7-204ENST00000587502 KRTAP4-12Q9BQ66 201 aa5.54□□□□□ -1.52
LSM7-204ENST00000587502 LCE3DQ9BYE3 92 aa5.43□□□□□ -1.54
LSM7-204ENST00000587502 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
LSM7-204ENST00000587502 NDUFAF8A1L188 74 aa5.11□□□□□ -1.59
LSM7-204ENST00000587502 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.05□□□□□ -1.6
LSM7-204ENST00000587502 KRTAP5-11Q6L8G4 156 aa5.02□□□□□ -1.61
LSM7-204ENST00000587502 H3BS24 57 aa5.01□□□□□ -1.61
LSM7-204ENST00000587502 LCE1FQ5T754 118 aa4.93□□□□□ -1.62
LSM7-204ENST00000587502 PHGR1C9JFL3 82 aa4.76□□□□□ -1.65
LSM7-204ENST00000587502 KRTAP21-2Q3LI59 83 aa4.61□□□□□ -1.67
LSM7-204ENST00000587502 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
LSM7-204ENST00000587502 INE1O15225 51 aa4.23□□□□□ -1.73
LSM7-204ENST00000587502 KRTAP4-4Q9BYR3 166 aa4.19□□□□□ -1.74
LSM7-204ENST00000587502 PRM1P04553 51 aa4.09□□□□□ -1.75
LSM7-204ENST00000587502 MUC19Q7Z5P9 8384 aa3.92□□□□□ -1.78
LSM7-204ENST00000587502 KRTAP21-1Q3LI58 79 aa3.61□□□□□ -1.83
LSM7-204ENST00000587502 MUC16Q8WXI7 14507 aa2.82□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 112.7 ms