RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 K7ERS5 55 aa5.33□□□□□ -1.56
ATG4D-207ENST00000587256 MT1GP13640 62 aa5.32□□□□□ -1.56
ATG4D-207ENST00000587256 PP632Q6XCG6 107 aa5.32□□□□□ -1.56
ATG4D-207ENST00000587256 DSTQ03001 7570 aaKnown RBP5.3□□□□□ -1.56
ATG4D-207ENST00000587256 MT1LQ93083 61 aa5.29□□□□□ -1.56
ATG4D-207ENST00000587256 MT1MQ8N339 61 aa5.25□□□□□ -1.57
ATG4D-207ENST00000587256 A6NED7 52 aa5.23□□□□□ -1.57
ATG4D-207ENST00000587256 KRTAP25-1Q3LHN0 102 aa5.22□□□□□ -1.57
ATG4D-207ENST00000587256 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
ATG4D-207ENST00000587256 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
ATG4D-207ENST00000587256 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
ATG4D-207ENST00000587256 CDC42SE1Q9NRR8 79 aa5.05□□□□□ -1.6
ATG4D-207ENST00000587256 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
ATG4D-207ENST00000587256 LCE4AQ5TA78 99 aa5□□□□□ -1.61
ATG4D-207ENST00000587256 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
ATG4D-207ENST00000587256 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
ATG4D-207ENST00000587256 MT4P47944 62 aa4.96□□□□□ -1.62
ATG4D-207ENST00000587256 ROMO1P60602 79 aa4.96□□□□□ -1.62
ATG4D-207ENST00000587256 GPR98Q8WXG9 6306 aa4.95□□□□□ -1.62
ATG4D-207ENST00000587256 HMCN1Q96RW7 5635 aa4.95□□□□□ -1.62
ATG4D-207ENST00000587256 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.63
ATG4D-207ENST00000587256 KRTAP15-1Q3LI76 137 aa4.89□□□□□ -1.63
ATG4D-207ENST00000587256 BRK1Q8WUW1 75 aa4.89□□□□□ -1.63
ATG4D-207ENST00000587256 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
ATG4D-207ENST00000587256 PRO0628Q9UI54 55 aa4.81□□□□□ -1.64
ATG4D-207ENST00000587256 KRTAP4-6Q9BYQ5 205 aa4.79□□□□□ -1.64
ATG4D-207ENST00000587256 LCE3CQ5T5A8 94 aa4.78□□□□□ -1.64
ATG4D-207ENST00000587256 KRTAP5-5Q701N2 237 aaPredicted RBP4.77□□□□□ -1.65
ATG4D-207ENST00000587256 LOC100996750A0A140TA64 210 aa4.76□□□□□ -1.65
ATG4D-207ENST00000587256 AHNAK2Q8IVF2 5795 aa4.75□□□□□ -1.65
ATG4D-207ENST00000587256 KRTAP12-4P60329 112 aa4.65□□□□□ -1.67
ATG4D-207ENST00000587256 KRTAP20-2Q3LI61 65 aa4.65□□□□□ -1.67
ATG4D-207ENST00000587256 SYNE1Q8NF91 8797 aaKnown RBP4.65□□□□□ -1.67
ATG4D-207ENST00000587256 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
ATG4D-207ENST00000587256 PMAIP1Q13794 54 aa4.61□□□□□ -1.67
ATG4D-207ENST00000587256 KRTAP5-10Q6L8G5 202 aa4.55□□□□□ -1.68
ATG4D-207ENST00000587256 SVIPQ8NHG7 77 aa4.54□□□□□ -1.68
ATG4D-207ENST00000587256 MT1AP04731 61 aa4.51□□□□□ -1.69
ATG4D-207ENST00000587256 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
ATG4D-207ENST00000587256 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
ATG4D-207ENST00000587256 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
ATG4D-207ENST00000587256 KTN1-AS1Q86SY8 53 aa4.46□□□□□ -1.7
ATG4D-207ENST00000587256 PRAC1Q96KF2 57 aa4.38□□□□□ -1.71
ATG4D-207ENST00000587256 KRTAP5-7Q6L8G8 165 aa4.35□□□□□ -1.71
ATG4D-207ENST00000587256 KRTAP5-2Q701N4 177 aa4.32□□□□□ -1.72
ATG4D-207ENST00000587256 KRTAP9-4Q9BYQ2 154 aa4.32□□□□□ -1.72
ATG4D-207ENST00000587256 KRTAP6-2Q3LI66 62 aa4.25□□□□□ -1.73
ATG4D-207ENST00000587256 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.74
ATG4D-207ENST00000587256 MT3P25713 68 aa4.12□□□□□ -1.75
ATG4D-207ENST00000587256 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
ATG4D-207ENST00000587256 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
ATG4D-207ENST00000587256 AHNAKQ09666 5890 aaKnown RBP3.93□□□□□ -1.78
ATG4D-207ENST00000587256 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
ATG4D-207ENST00000587256 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
ATG4D-207ENST00000587256 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
ATG4D-207ENST00000587256 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
ATG4D-207ENST00000587256 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
ATG4D-207ENST00000587256 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
ATG4D-207ENST00000587256 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
ATG4D-207ENST00000587256 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
ATG4D-207ENST00000587256 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
ATG4D-207ENST00000587256 NDUFAF8A1L188 74 aa3.46□□□□□ -1.86
ATG4D-207ENST00000587256 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
ATG4D-207ENST00000587256 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
ATG4D-207ENST00000587256 KRTAP4-12Q9BQ66 201 aa3.17□□□□□ -1.9
ATG4D-207ENST00000587256 H3BS24 57 aa3.16□□□□□ -1.9
ATG4D-207ENST00000587256 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
ATG4D-207ENST00000587256 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
ATG4D-207ENST00000587256 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
ATG4D-207ENST00000587256 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
ATG4D-207ENST00000587256 KRTAP21-2Q3LI59 83 aa2.93□□□□□ -1.94
ATG4D-207ENST00000587256 INE1O15225 51 aa2.9□□□□□ -1.95
ATG4D-207ENST00000587256 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
ATG4D-207ENST00000587256 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
ATG4D-207ENST00000587256 PRM1P04553 51 aa2.54□□□□□ -2
ATG4D-207ENST00000587256 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
ATG4D-207ENST00000587256 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
ATG4D-207ENST00000587256 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 96.3 ms