RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 MIR22HGQ0VDD5 57 aa7.29□□□□□ -1.24
VAT1-203ENST00000587062 K7ERS5 55 aa7.28□□□□□ -1.24
VAT1-203ENST00000587062 PSPHP1O15172 72 aa7.21□□□□□ -1.26
VAT1-203ENST00000587062 MT1LQ93083 61 aa7.2□□□□□ -1.26
VAT1-203ENST00000587062 DSTQ03001 7570 aaKnown RBP7.15□□□□□ -1.26
VAT1-203ENST00000587062 MT1MQ8N339 61 aa7.15□□□□□ -1.26
VAT1-203ENST00000587062 KRTAP25-1Q3LHN0 102 aa7.11□□□□□ -1.27
VAT1-203ENST00000587062 KRTAP12-3P60328 96 aa7.08□□□□□ -1.28
VAT1-203ENST00000587062 A6NED7 52 aa7.02□□□□□ -1.29
VAT1-203ENST00000587062 KRTAP4-9Q9BYQ8 210 aa7.01□□□□□ -1.29
VAT1-203ENST00000587062 LCE4AQ5TA78 99 aa6.98□□□□□ -1.29
VAT1-203ENST00000587062 GPR98Q8WXG9 6306 aa6.95□□□□□ -1.3
VAT1-203ENST00000587062 KRTAP4-3Q9BYR4 195 aa6.91□□□□□ -1.3
VAT1-203ENST00000587062 LCE1DQ5T752 114 aa6.87□□□□□ -1.31
VAT1-203ENST00000587062 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
VAT1-203ENST00000587062 MT4P47944 62 aa6.83□□□□□ -1.32
VAT1-203ENST00000587062 CDC42SE1Q9NRR8 79 aa6.83□□□□□ -1.32
VAT1-203ENST00000587062 KRTAP19-4Q3LI73 84 aa6.82□□□□□ -1.32
VAT1-203ENST00000587062 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
VAT1-203ENST00000587062 KRTAP5-4Q6L8H1 288 aa6.76□□□□□ -1.33
VAT1-203ENST00000587062 ROMO1P60602 79 aa6.67□□□□□ -1.34
VAT1-203ENST00000587062 KRTAP15-1Q3LI76 137 aa6.65□□□□□ -1.34
VAT1-203ENST00000587062 HMCN1Q96RW7 5635 aa6.64□□□□□ -1.35
VAT1-203ENST00000587062 KRTAP4-6Q9BYQ5 205 aa6.59□□□□□ -1.35
VAT1-203ENST00000587062 LCE3CQ5T5A8 94 aa6.52□□□□□ -1.37
VAT1-203ENST00000587062 KRTAP5-5Q701N2 237 aaPredicted RBP6.51□□□□□ -1.37
VAT1-203ENST00000587062 KRTAP12-4P60329 112 aa6.49□□□□□ -1.37
VAT1-203ENST00000587062 BRK1Q8WUW1 75 aa6.49□□□□□ -1.37
VAT1-203ENST00000587062 AHNAK2Q8IVF2 5795 aa6.43□□□□□ -1.38
VAT1-203ENST00000587062 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
VAT1-203ENST00000587062 SPRR5A0A1B0GTR4 108 aa6.43□□□□□ -1.38
VAT1-203ENST00000587062 KRTAP20-2Q3LI61 65 aa6.39□□□□□ -1.39
VAT1-203ENST00000587062 KRTAP5-10Q6L8G5 202 aa6.32□□□□□ -1.4
VAT1-203ENST00000587062 KRTAP5-3Q6L8H2 238 aa6.23□□□□□ -1.41
VAT1-203ENST00000587062 PMAIP1Q13794 54 aa6.16□□□□□ -1.42
VAT1-203ENST00000587062 MT1AP04731 61 aa6.15□□□□□ -1.42
VAT1-203ENST00000587062 KRTAP5-7Q6L8G8 165 aa6.1□□□□□ -1.43
VAT1-203ENST00000587062 SYNE1Q8NF91 8797 aaKnown RBP6.09□□□□□ -1.43
VAT1-203ENST00000587062 PRO0628Q9UI54 55 aa6.09□□□□□ -1.43
VAT1-203ENST00000587062 KRTAP6-1Q3LI64 71 aa6.06□□□□□ -1.44
VAT1-203ENST00000587062 KRTAP9-6A8MVA2 160 aa6.01□□□□□ -1.45
VAT1-203ENST00000587062 KRTAP9-4Q9BYQ2 154 aa5.96□□□□□ -1.46
VAT1-203ENST00000587062 KRTAP5-2Q701N4 177 aa5.92□□□□□ -1.46
VAT1-203ENST00000587062 KRTAP4-11Q9BYQ6 195 aa5.84□□□□□ -1.47
VAT1-203ENST00000587062 KRTAP6-2Q3LI66 62 aa5.8□□□□□ -1.48
VAT1-203ENST00000587062 PRAC1Q96KF2 57 aa5.75□□□□□ -1.49
VAT1-203ENST00000587062 KTN1-AS1Q86SY8 53 aa5.71□□□□□ -1.5
VAT1-203ENST00000587062 MT3P25713 68 aa5.69□□□□□ -1.5
VAT1-203ENST00000587062 KRTAP5-8O75690 187 aa5.6□□□□□ -1.51
VAT1-203ENST00000587062 OBSCNQ5VST9 7968 aa5.43□□□□□ -1.54
VAT1-203ENST00000587062 KRTAP9-9Q9BYP9 154 aa5.41□□□□□ -1.54
VAT1-203ENST00000587062 AHNAKQ09666 5890 aaKnown RBP5.4□□□□□ -1.55
VAT1-203ENST00000587062 MUC5BQ9HC84 5762 aaPredicted RBP5.36□□□□□ -1.55
VAT1-203ENST00000587062 SVIPQ8NHG7 77 aa5.35□□□□□ -1.55
VAT1-203ENST00000587062 MUC5ACP98088 5654 aa5.3□□□□□ -1.56
VAT1-203ENST00000587062 KRTAP5-1Q6L8H4 278 aa5.29□□□□□ -1.56
VAT1-203ENST00000587062 LCE1EQ5T753 118 aa5.2□□□□□ -1.58
VAT1-203ENST00000587062 LUZP6Q538Z0 58 aa4.88□□□□□ -1.63
VAT1-203ENST00000587062 LCE1BQ5T7P3 118 aa4.87□□□□□ -1.63
VAT1-203ENST00000587062 LCE1CQ5T751 118 aa4.8□□□□□ -1.64
VAT1-203ENST00000587062 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
VAT1-203ENST00000587062 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
VAT1-203ENST00000587062 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
VAT1-203ENST00000587062 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.35□□□□□ -1.71
VAT1-203ENST00000587062 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
VAT1-203ENST00000587062 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
VAT1-203ENST00000587062 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
VAT1-203ENST00000587062 LCE1FQ5T754 118 aa4.25□□□□□ -1.73
VAT1-203ENST00000587062 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
VAT1-203ENST00000587062 PHGR1C9JFL3 82 aa3.73□□□□□ -1.81
VAT1-203ENST00000587062 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
VAT1-203ENST00000587062 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
VAT1-203ENST00000587062 INE1O15225 51 aa3.6□□□□□ -1.83
VAT1-203ENST00000587062 PRM1P04553 51 aa3.36□□□□□ -1.87
VAT1-203ENST00000587062 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
VAT1-203ENST00000587062 H3BS24 57 aa3.13□□□□□ -1.91
VAT1-203ENST00000587062 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
VAT1-203ENST00000587062 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 159.4 ms