RNA–Protein interactions for RNA: ENST00000586884.1

MBD1-215, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-215	ENST00000586884	KRTAP5-7	Q6L8G8	165 aa		5.17	□□□□□ -1.58
MBD1-215	ENST00000586884	KRTAP5-3	Q6L8H2	238 aa		5.15	□□□□□ -1.59
MBD1-215	ENST00000586884		A8MU10	97 aa		5.12	□□□□□ -1.59
MBD1-215	ENST00000586884		A0A1B0GU69	56 aa		5.11	□□□□□ -1.59
MBD1-215	ENST00000586884	KRTAP4-7	Q9BYR0	210 aa		5.09	□□□□□ -1.59
MBD1-215	ENST00000586884	KRTAP20-2	Q3LI61	65 aa		5.08	□□□□□ -1.6
MBD1-215	ENST00000586884	KRTAP12-3	P60328	96 aa		5.06	□□□□□ -1.6
MBD1-215	ENST00000586884		H7BZZ5	65 aa		5.05	□□□□□ -1.6
MBD1-215	ENST00000586884	COX7C	P15954	63 aa		5.05	□□□□□ -1.6
MBD1-215	ENST00000586884	SPRR5	A0A1B0GTR4	108 aa		5.04	□□□□□ -1.6
MBD1-215	ENST00000586884	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.03	□□□□□ -1.6
MBD1-215	ENST00000586884	KRTAP12-4	P60329	112 aa		4.98	□□□□□ -1.61
MBD1-215	ENST00000586884	SVIP	Q8NHG7	77 aa		4.96	□□□□□ -1.62
MBD1-215	ENST00000586884	PRR15L	Q9BU68	103 aa		4.89	□□□□□ -1.63
MBD1-215	ENST00000586884	SYNE1	Q8NF91	8797 aa	Known RBP	4.86	□□□□□ -1.63
MBD1-215	ENST00000586884	LOC100996750	A0A140TA64	210 aa		4.84	□□□□□ -1.63
MBD1-215	ENST00000586884	KRTAP19-4	Q3LI73	84 aa		4.79	□□□□□ -1.64
MBD1-215	ENST00000586884	ANAPC13	Q9BS18	74 aa		4.78	□□□□□ -1.64
MBD1-215	ENST00000586884	KRTAP25-1	Q3LHN0	102 aa		4.77	□□□□□ -1.65
MBD1-215	ENST00000586884	LINC01558	Q9Y6Z2	57 aa		4.75	□□□□□ -1.65
MBD1-215	ENST00000586884	UQCR11	O14957	56 aa		4.71	□□□□□ -1.66
MBD1-215	ENST00000586884	ATP5E	P56381	51 aa	Predicted RBP	4.7	□□□□□ -1.66
MBD1-215	ENST00000586884	KRTAP4-11	Q9BYQ6	195 aa		4.7	□□□□□ -1.66
MBD1-215	ENST00000586884	KRTAP5-2	Q701N4	177 aa		4.65	□□□□□ -1.67
MBD1-215	ENST00000586884	KRTAP15-1	Q3LI76	137 aa		4.63	□□□□□ -1.67
MBD1-215	ENST00000586884	LCE3C	Q5T5A8	94 aa		4.62	□□□□□ -1.67
MBD1-215	ENST00000586884	CCDC179	H3BU77	68 aa		4.6	□□□□□ -1.67
MBD1-215	ENST00000586884	RPS28	P62857	69 aa	Known RBP	4.6	□□□□□ -1.67
MBD1-215	ENST00000586884	MT1A	P04731	61 aa		4.59	□□□□□ -1.67
MBD1-215	ENST00000586884	KRTAP23-1	A1A580	65 aa		4.58	□□□□□ -1.68
MBD1-215	ENST00000586884		K7ERS5	55 aa		4.56	□□□□□ -1.68
MBD1-215	ENST00000586884	MIR22HG	Q0VDD5	57 aa		4.56	□□□□□ -1.68
MBD1-215	ENST00000586884	KRTAP6-1	Q3LI64	71 aa		4.56	□□□□□ -1.68
MBD1-215	ENST00000586884	KRTAP5-8	O75690	187 aa		4.55	□□□□□ -1.68
MBD1-215	ENST00000586884	AHNAK	Q09666	5890 aa	Known RBP	4.54	□□□□□ -1.68
MBD1-215	ENST00000586884	TMEM258	P61165	79 aa		4.54	□□□□□ -1.68
MBD1-215	ENST00000586884	MUC5AC	P98088	5654 aa		4.5	□□□□□ -1.69
MBD1-215	ENST00000586884	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.5	□□□□□ -1.69
MBD1-215	ENST00000586884	KRTAP9-4	Q9BYQ2	154 aa		4.47	□□□□□ -1.69
MBD1-215	ENST00000586884	KRTAP6-2	Q3LI66	62 aa		4.43	□□□□□ -1.7
MBD1-215	ENST00000586884	OBSCN	Q5VST9	7968 aa		4.4	□□□□□ -1.71
MBD1-215	ENST00000586884	KRTAP9-9	Q9BYP9	154 aa		4.38	□□□□□ -1.71
MBD1-215	ENST00000586884	KRTAP9-6	A8MVA2	160 aa		4.35	□□□□□ -1.71
MBD1-215	ENST00000586884	PRO0628	Q9UI54	55 aa		4.32	□□□□□ -1.72
MBD1-215	ENST00000586884	PSPHP1	O15172	72 aa		4.29	□□□□□ -1.72
MBD1-215	ENST00000586884		V9GYY9	64 aa		4.29	□□□□□ -1.72
MBD1-215	ENST00000586884	CDC42SE1	Q9NRR8	79 aa		4.27	□□□□□ -1.73
MBD1-215	ENST00000586884		Q1T7F1	81 aa		4.25	□□□□□ -1.73
MBD1-215	ENST00000586884	MT3	P25713	68 aa		4.23	□□□□□ -1.73
MBD1-215	ENST00000586884	KRTAP5-1	Q6L8H4	278 aa		4.22	□□□□□ -1.73
MBD1-215	ENST00000586884	ROMO1	P60602	79 aa		4.18	□□□□□ -1.74
MBD1-215	ENST00000586884		A6NED7	52 aa		4.14	□□□□□ -1.75
MBD1-215	ENST00000586884	BRK1	Q8WUW1	75 aa		4.14	□□□□□ -1.75
MBD1-215	ENST00000586884	PMAIP1	Q13794	54 aa		4.06	□□□□□ -1.76
MBD1-215	ENST00000586884	LCE1E	Q5T753	118 aa		3.95	□□□□□ -1.78
MBD1-215	ENST00000586884	KTN1-AS1	Q86SY8	53 aa		3.94	□□□□□ -1.78
MBD1-215	ENST00000586884	KRTAP4-2	Q9BYR5	136 aa		3.75	□□□□□ -1.81
MBD1-215	ENST00000586884	LCE1B	Q5T7P3	118 aa		3.72	□□□□□ -1.81
MBD1-215	ENST00000586884	LCE1C	Q5T751	118 aa		3.67	□□□□□ -1.82
MBD1-215	ENST00000586884	PRAC1	Q96KF2	57 aa		3.56	□□□□□ -1.84
MBD1-215	ENST00000586884	KRTAP4-12	Q9BQ66	201 aa		3.47	□□□□□ -1.85
MBD1-215	ENST00000586884		H3BS24	57 aa		3.43	□□□□□ -1.86
MBD1-215	ENST00000586884	KRTAP5-11	Q6L8G4	156 aa		3.35	□□□□□ -1.87
MBD1-215	ENST00000586884	LCE1F	Q5T754	118 aa		3.33	□□□□□ -1.88
MBD1-215	ENST00000586884	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.31	□□□□□ -1.88
MBD1-215	ENST00000586884	LCE3D	Q9BYE3	92 aa		3.28	□□□□□ -1.88
MBD1-215	ENST00000586884	PHGR1	C9JFL3	82 aa		3.12	□□□□□ -1.91
MBD1-215	ENST00000586884	NDUFAF8	A1L188	74 aa		3.09	□□□□□ -1.91
MBD1-215	ENST00000586884	LCE3E	Q5T5B0	92 aa		3.03	□□□□□ -1.92
MBD1-215	ENST00000586884	KRTAP21-2	Q3LI59	83 aa		3.02	□□□□□ -1.93
MBD1-215	ENST00000586884	LUZP6	Q538Z0	58 aa		2.99	□□□□□ -1.93
MBD1-215	ENST00000586884		A0A0A0MQY5	61 aa		2.96	□□□□□ -1.94
MBD1-215	ENST00000586884	KRTAP4-4	Q9BYR3	166 aa		2.78	□□□□□ -1.96
MBD1-215	ENST00000586884	MUC19	Q7Z5P9	8384 aa		2.74	□□□□□ -1.97
MBD1-215	ENST00000586884	INE1	O15225	51 aa		2.7	□□□□□ -1.98
MBD1-215	ENST00000586884	KRTAP21-1	Q3LI58	79 aa		2.39	□□□□□ -2.03
MBD1-215	ENST00000586884	PRM1	P04553	51 aa		2.1	□□□□□ -2.07
MBD1-215	ENST00000586884	MUC16	Q8WXI7	14507 aa		1.87	□□□□□ -2.11

Retrieved 78 of 20,778 RNA–protein pairs in 286.7 ms