RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 KRTAP25-1Q3LHN0 102 aa5.06□□□□□ -1.6
PRKCSH-202ENST00000585540 KRTAP19-5Q3LI72 72 aa5.06□□□□□ -1.6
PRKCSH-202ENST00000585540 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
PRKCSH-202ENST00000585540 GPR98Q8WXG9 6306 aa5.05□□□□□ -1.6
PRKCSH-202ENST00000585540 LCE3BQ5TA77 95 aa5.03□□□□□ -1.6
PRKCSH-202ENST00000585540 MT1GP13640 62 aa5.02□□□□□ -1.61
PRKCSH-202ENST00000585540 PP632Q6XCG6 107 aa5.02□□□□□ -1.61
PRKCSH-202ENST00000585540 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
PRKCSH-202ENST00000585540 MT1LQ93083 61 aa4.93□□□□□ -1.62
PRKCSH-202ENST00000585540 ROMO1P60602 79 aa4.91□□□□□ -1.62
PRKCSH-202ENST00000585540 KRTAP12-3P60328 96 aa4.9□□□□□ -1.63
PRKCSH-202ENST00000585540 MT1MQ8N339 61 aa4.86□□□□□ -1.63
PRKCSH-202ENST00000585540 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
PRKCSH-202ENST00000585540 BRK1Q8WUW1 75 aa4.84□□□□□ -1.63
PRKCSH-202ENST00000585540 DSTQ03001 7570 aaKnown RBP4.77□□□□□ -1.65
PRKCSH-202ENST00000585540 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
PRKCSH-202ENST00000585540 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
PRKCSH-202ENST00000585540 LCE4AQ5TA78 99 aa4.68□□□□□ -1.66
PRKCSH-202ENST00000585540 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
PRKCSH-202ENST00000585540 KRTAP15-1Q3LI76 137 aa4.66□□□□□ -1.66
PRKCSH-202ENST00000585540 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
PRKCSH-202ENST00000585540 PMAIP1Q13794 54 aa4.54□□□□□ -1.68
PRKCSH-202ENST00000585540 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
PRKCSH-202ENST00000585540 LCE3CQ5T5A8 94 aa4.52□□□□□ -1.69
PRKCSH-202ENST00000585540 HMCN1Q96RW7 5635 aa4.49□□□□□ -1.69
PRKCSH-202ENST00000585540 AHNAK2Q8IVF2 5795 aa4.48□□□□□ -1.69
PRKCSH-202ENST00000585540 MT4P47944 62 aa4.46□□□□□ -1.7
PRKCSH-202ENST00000585540 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
PRKCSH-202ENST00000585540 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
PRKCSH-202ENST00000585540 KRTAP5-10Q6L8G5 202 aa4.43□□□□□ -1.7
PRKCSH-202ENST00000585540 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
PRKCSH-202ENST00000585540 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
PRKCSH-202ENST00000585540 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
PRKCSH-202ENST00000585540 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
PRKCSH-202ENST00000585540 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
PRKCSH-202ENST00000585540 KRTAP5-7Q6L8G8 165 aa4.31□□□□□ -1.72
PRKCSH-202ENST00000585540 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
PRKCSH-202ENST00000585540 KRTAP20-2Q3LI61 65 aa4.28□□□□□ -1.72
PRKCSH-202ENST00000585540 MT1AP04731 61 aa4.24□□□□□ -1.73
PRKCSH-202ENST00000585540 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
PRKCSH-202ENST00000585540 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
PRKCSH-202ENST00000585540 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
PRKCSH-202ENST00000585540 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
PRKCSH-202ENST00000585540 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
PRKCSH-202ENST00000585540 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
PRKCSH-202ENST00000585540 SVIPQ8NHG7 77 aa4.01□□□□□ -1.77
PRKCSH-202ENST00000585540 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
PRKCSH-202ENST00000585540 MT3P25713 68 aa3.89□□□□□ -1.79
PRKCSH-202ENST00000585540 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
PRKCSH-202ENST00000585540 AHNAKQ09666 5890 aaKnown RBP3.84□□□□□ -1.79
PRKCSH-202ENST00000585540 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
PRKCSH-202ENST00000585540 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
PRKCSH-202ENST00000585540 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
PRKCSH-202ENST00000585540 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
PRKCSH-202ENST00000585540 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
PRKCSH-202ENST00000585540 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
PRKCSH-202ENST00000585540 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
PRKCSH-202ENST00000585540 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
PRKCSH-202ENST00000585540 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
PRKCSH-202ENST00000585540 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
PRKCSH-202ENST00000585540 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
PRKCSH-202ENST00000585540 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
PRKCSH-202ENST00000585540 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
PRKCSH-202ENST00000585540 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
PRKCSH-202ENST00000585540 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
PRKCSH-202ENST00000585540 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
PRKCSH-202ENST00000585540 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
PRKCSH-202ENST00000585540 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
PRKCSH-202ENST00000585540 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
PRKCSH-202ENST00000585540 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
PRKCSH-202ENST00000585540 A0A0A0MQY5 61 aa2.6□□□□□ -1.99
PRKCSH-202ENST00000585540 INE1O15225 51 aa2.55□□□□□ -2
PRKCSH-202ENST00000585540 PRM1P04553 51 aa2.55□□□□□ -2
PRKCSH-202ENST00000585540 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
PRKCSH-202ENST00000585540 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
PRKCSH-202ENST00000585540 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
PRKCSH-202ENST00000585540 H3BS24 57 aa1.89□□□□□ -2.11
PRKCSH-202ENST00000585540 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 164 ms