RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 K7ERS5 55 aa9.09□□□□□ -0.95
TTC39C-209ENST00000584250 TNP1P09430 55 aa9.07□□□□□ -0.96
TTC39C-209ENST00000584250 LCE3AQ5TA76 89 aa9.07□□□□□ -0.96
TTC39C-209ENST00000584250 CDC42SE1Q9NRR8 79 aa8.94□□□□□ -0.98
TTC39C-209ENST00000584250 MT1GP13640 62 aa8.88□□□□□ -0.99
TTC39C-209ENST00000584250 MT1LQ93083 61 aa8.88□□□□□ -0.99
TTC39C-209ENST00000584250 MT1MQ8N339 61 aa8.8□□□□□ -1
TTC39C-209ENST00000584250 DSTQ03001 7570 aaKnown RBP8.8□□□□□ -1
TTC39C-209ENST00000584250 PP632Q6XCG6 107 aa8.74□□□□□ -1.01
TTC39C-209ENST00000584250 KRTAP25-1Q3LHN0 102 aa8.69□□□□□ -1.02
TTC39C-209ENST00000584250 KRTAP4-3Q9BYR4 195 aa8.68□□□□□ -1.02
TTC39C-209ENST00000584250 KRTAP12-3P60328 96 aa8.67□□□□□ -1.02
TTC39C-209ENST00000584250 ROMO1P60602 79 aa8.59□□□□□ -1.03
TTC39C-209ENST00000584250 BRK1Q8WUW1 75 aa8.58□□□□□ -1.04
TTC39C-209ENST00000584250 KRTAP4-7Q9BYR0 210 aa8.55□□□□□ -1.04
TTC39C-209ENST00000584250 KRTAP4-9Q9BYQ8 210 aa8.54□□□□□ -1.04
TTC39C-209ENST00000584250 KRTAP23-1A1A580 65 aa8.38□□□□□ -1.07
TTC39C-209ENST00000584250 LCE1DQ5T752 114 aa8.33□□□□□ -1.08
TTC39C-209ENST00000584250 LCE4AQ5TA78 99 aa8.3□□□□□ -1.08
TTC39C-209ENST00000584250 MT4P47944 62 aa8.27□□□□□ -1.09
TTC39C-209ENST00000584250 KRTAP5-4Q6L8H1 288 aa8.25□□□□□ -1.09
TTC39C-209ENST00000584250 GPR98Q8WXG9 6306 aa8.19□□□□□ -1.1
TTC39C-209ENST00000584250 KRTAP15-1Q3LI76 137 aa8.16□□□□□ -1.1
TTC39C-209ENST00000584250 HMCN1Q96RW7 5635 aa8.11□□□□□ -1.11
TTC39C-209ENST00000584250 PMAIP1Q13794 54 aa8.09□□□□□ -1.11
TTC39C-209ENST00000584250 KRTAP5-5Q701N2 237 aaPredicted RBP8.05□□□□□ -1.12
TTC39C-209ENST00000584250 KRTAP19-4Q3LI73 84 aa8.02□□□□□ -1.13
TTC39C-209ENST00000584250 LCE3CQ5T5A8 94 aa8.01□□□□□ -1.13
TTC39C-209ENST00000584250 PRO0628Q9UI54 55 aa7.97□□□□□ -1.13
TTC39C-209ENST00000584250 KRTAP4-12Q9BQ66 201 aa7.79□□□□□ -1.16
TTC39C-209ENST00000584250 KRTAP20-2Q3LI61 65 aa7.78□□□□□ -1.16
TTC39C-209ENST00000584250 AHNAK2Q8IVF2 5795 aa7.76□□□□□ -1.17
TTC39C-209ENST00000584250 KRTAP9-9Q9BYP9 154 aa7.75□□□□□ -1.17
TTC39C-209ENST00000584250 KRTAP9-4Q9BYQ2 154 aa7.75□□□□□ -1.17
TTC39C-209ENST00000584250 KRTAP5-10Q6L8G5 202 aa7.72□□□□□ -1.17
TTC39C-209ENST00000584250 SYNE1Q8NF91 8797 aaKnown RBP7.71□□□□□ -1.18
TTC39C-209ENST00000584250 SPRR5A0A1B0GTR4 108 aa7.7□□□□□ -1.18
TTC39C-209ENST00000584250 KRTAP12-4P60329 112 aa7.69□□□□□ -1.18
TTC39C-209ENST00000584250 KRTAP9-6A8MVA2 160 aa7.67□□□□□ -1.18
TTC39C-209ENST00000584250 PRAC1Q96KF2 57 aa7.67□□□□□ -1.18
TTC39C-209ENST00000584250 KRTAP5-3Q6L8H2 238 aa7.56□□□□□ -1.2
TTC39C-209ENST00000584250 MT1AP04731 61 aa7.54□□□□□ -1.2
TTC39C-209ENST00000584250 KRTAP6-1Q3LI64 71 aa7.54□□□□□ -1.2
TTC39C-209ENST00000584250 KTN1-AS1Q86SY8 53 aa7.49□□□□□ -1.21
TTC39C-209ENST00000584250 KRTAP5-7Q6L8G8 165 aa7.43□□□□□ -1.22
TTC39C-209ENST00000584250 KRTAP5-2Q701N4 177 aa7.27□□□□□ -1.25
TTC39C-209ENST00000584250 KRTAP4-2Q9BYR5 136 aa7.15□□□□□ -1.26
TTC39C-209ENST00000584250 KRTAP6-2Q3LI66 62 aa7.14□□□□□ -1.27
TTC39C-209ENST00000584250 SVIPQ8NHG7 77 aa7.13□□□□□ -1.27
TTC39C-209ENST00000584250 KRTAP4-11Q9BYQ6 195 aa7.04□□□□□ -1.28
TTC39C-209ENST00000584250 MT3P25713 68 aa6.84□□□□□ -1.31
TTC39C-209ENST00000584250 KRTAP5-8O75690 187 aa6.83□□□□□ -1.32
TTC39C-209ENST00000584250 H3BS24 57 aa6.75□□□□□ -1.33
TTC39C-209ENST00000584250 OBSCNQ5VST9 7968 aa6.73□□□□□ -1.33
TTC39C-209ENST00000584250 KRTAP5-1Q6L8H4 278 aa6.5□□□□□ -1.37
TTC39C-209ENST00000584250 MUC5ACP98088 5654 aa6.37□□□□□ -1.39
TTC39C-209ENST00000584250 LUZP6Q538Z0 58 aa6.36□□□□□ -1.39
TTC39C-209ENST00000584250 MUC5BQ9HC84 5762 aaPredicted RBP6.34□□□□□ -1.39
TTC39C-209ENST00000584250 AHNAKQ09666 5890 aaKnown RBP6.27□□□□□ -1.41
TTC39C-209ENST00000584250 LCE1EQ5T753 118 aa6.21□□□□□ -1.42
TTC39C-209ENST00000584250 LCE1BQ5T7P3 118 aa5.91□□□□□ -1.46
TTC39C-209ENST00000584250 LCE3DQ9BYE3 92 aa5.79□□□□□ -1.48
TTC39C-209ENST00000584250 LCE1CQ5T751 118 aa5.78□□□□□ -1.48
TTC39C-209ENST00000584250 NDUFAF8A1L188 74 aa5.68□□□□□ -1.5
TTC39C-209ENST00000584250 LCE3EQ5T5B0 92 aa5.48□□□□□ -1.53
TTC39C-209ENST00000584250 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.29□□□□□ -1.56
TTC39C-209ENST00000584250 KRTAP5-11Q6L8G4 156 aa5.23□□□□□ -1.57
TTC39C-209ENST00000584250 LCE1FQ5T754 118 aa4.98□□□□□ -1.61
TTC39C-209ENST00000584250 KRTAP21-2Q3LI59 83 aa4.96□□□□□ -1.62
TTC39C-209ENST00000584250 A0A0A0MQY5 61 aa4.78□□□□□ -1.64
TTC39C-209ENST00000584250 INE1O15225 51 aa4.64□□□□□ -1.67
TTC39C-209ENST00000584250 KRTAP4-4Q9BYR3 166 aa4.57□□□□□ -1.68
TTC39C-209ENST00000584250 PHGR1C9JFL3 82 aa4.52□□□□□ -1.69
TTC39C-209ENST00000584250 PRM1P04553 51 aa4.43□□□□□ -1.7
TTC39C-209ENST00000584250 MUC19Q7Z5P9 8384 aa4.15□□□□□ -1.75
TTC39C-209ENST00000584250 KRTAP21-1Q3LI58 79 aa3.39□□□□□ -1.87
TTC39C-209ENST00000584250 MUC16Q8WXI7 14507 aa2.97□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 9.3 ms