RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 TNP1P09430 55 aa4.86□□□□□ -1.63
GGA3-217ENST00000583667 PRAC1Q96KF2 57 aa4.85□□□□□ -1.63
GGA3-217ENST00000583667 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
GGA3-217ENST00000583667 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
GGA3-217ENST00000583667 PP632Q6XCG6 107 aa4.77□□□□□ -1.65
GGA3-217ENST00000583667 KRTAP8-1Q8IUC2 63 aa4.75□□□□□ -1.65
GGA3-217ENST00000583667 KRTAP10-12P60413 245 aa4.7□□□□□ -1.66
GGA3-217ENST00000583667 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
GGA3-217ENST00000583667 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
GGA3-217ENST00000583667 AHNAK2Q8IVF2 5795 aa4.63□□□□□ -1.67
GGA3-217ENST00000583667 LCE3AQ5TA76 89 aa4.61□□□□□ -1.67
GGA3-217ENST00000583667 KRTAP5-10Q6L8G5 202 aa4.61□□□□□ -1.67
GGA3-217ENST00000583667 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
GGA3-217ENST00000583667 KRTAP4-8A0A0G2JLE6 195 aa4.55□□□□□ -1.68
GGA3-217ENST00000583667 KRTAP4-8Q9BYQ9 185 aa4.55□□□□□ -1.68
GGA3-217ENST00000583667 KRTAP5-7Q6L8G8 165 aa4.53□□□□□ -1.68
GGA3-217ENST00000583667 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
GGA3-217ENST00000583667 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
GGA3-217ENST00000583667 MT4P47944 62 aa4.41□□□□□ -1.7
GGA3-217ENST00000583667 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
GGA3-217ENST00000583667 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.71
GGA3-217ENST00000583667 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
GGA3-217ENST00000583667 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
GGA3-217ENST00000583667 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
GGA3-217ENST00000583667 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
GGA3-217ENST00000583667 MT1EP04732 61 aa4.32□□□□□ -1.72
GGA3-217ENST00000583667 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
GGA3-217ENST00000583667 MT1LQ93083 61 aa4.23□□□□□ -1.73
GGA3-217ENST00000583667 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
GGA3-217ENST00000583667 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
GGA3-217ENST00000583667 MT1GP13640 62 aa4.15□□□□□ -1.75
GGA3-217ENST00000583667 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.75
GGA3-217ENST00000583667 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
GGA3-217ENST00000583667 AHNAKQ09666 5890 aaKnown RBP4.09□□□□□ -1.75
GGA3-217ENST00000583667 MT1MQ8N339 61 aa4.06□□□□□ -1.76
GGA3-217ENST00000583667 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
GGA3-217ENST00000583667 KRTAP4-7Q9BYR0 210 aa4.01□□□□□ -1.77
GGA3-217ENST00000583667 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
GGA3-217ENST00000583667 KRTAP20-2Q3LI61 65 aa3.95□□□□□ -1.78
GGA3-217ENST00000583667 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
GGA3-217ENST00000583667 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
GGA3-217ENST00000583667 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.79
GGA3-217ENST00000583667 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
GGA3-217ENST00000583667 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
GGA3-217ENST00000583667 LOC100996750A0A140TA64 210 aa3.76□□□□□ -1.81
GGA3-217ENST00000583667 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
GGA3-217ENST00000583667 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
GGA3-217ENST00000583667 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
GGA3-217ENST00000583667 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
GGA3-217ENST00000583667 MT1AP04731 61 aa3.61□□□□□ -1.83
GGA3-217ENST00000583667 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
GGA3-217ENST00000583667 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.84
GGA3-217ENST00000583667 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
GGA3-217ENST00000583667 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
GGA3-217ENST00000583667 H3BS24 57 aa3.51□□□□□ -1.85
GGA3-217ENST00000583667 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
GGA3-217ENST00000583667 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
GGA3-217ENST00000583667 INE1O15225 51 aa3.3□□□□□ -1.88
GGA3-217ENST00000583667 MT3P25713 68 aa3.28□□□□□ -1.88
GGA3-217ENST00000583667 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
GGA3-217ENST00000583667 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
GGA3-217ENST00000583667 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
GGA3-217ENST00000583667 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
GGA3-217ENST00000583667 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
GGA3-217ENST00000583667 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
GGA3-217ENST00000583667 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
GGA3-217ENST00000583667 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
GGA3-217ENST00000583667 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
GGA3-217ENST00000583667 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
GGA3-217ENST00000583667 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
GGA3-217ENST00000583667 PRM1P04553 51 aa2.61□□□□□ -1.99
GGA3-217ENST00000583667 LCE1FQ5T754 118 aa2.57□□□□□ -2
GGA3-217ENST00000583667 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
GGA3-217ENST00000583667 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
GGA3-217ENST00000583667 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
GGA3-217ENST00000583667 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
GGA3-217ENST00000583667 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
GGA3-217ENST00000583667 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 122.1 ms