RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 LCE5AQ5TCM9 118 aa2.54□□□□□ -2
CMTM4-205ENST00000581487 LCE1CQ5T751 118 aa2.53□□□□□ -2
CMTM4-205ENST00000581487 LCE1EQ5T753 118 aa2.53□□□□□ -2
CMTM4-205ENST00000581487 LCE1FQ5T754 118 aa2.53□□□□□ -2
CMTM4-205ENST00000581487 LCE1AQ5T7P2 110 aa2.53□□□□□ -2
CMTM4-205ENST00000581487 LCE1DQ5T752 114 aa2.53□□□□□ -2
CMTM4-205ENST00000581487 KRTAP9-3Q9BYQ3 159 aa2.52□□□□□ -2.01
CMTM4-205ENST00000581487 KRTAP4-8A0A0G2JLE6 195 aa2.51□□□□□ -2.01
CMTM4-205ENST00000581487 KRTAP4-8Q9BYQ9 185 aa2.51□□□□□ -2.01
CMTM4-205ENST00000581487 LCE4AQ5TA78 99 aa2.48□□□□□ -2.01
CMTM4-205ENST00000581487 PRM1P04553 51 aa2.45□□□□□ -2.02
CMTM4-205ENST00000581487 TNXBP22105 4242 aa2.45□□□□□ -2.02
CMTM4-205ENST00000581487 SYNE1Q8NF91 8797 aaKnown RBP2.44□□□□□ -2.02
CMTM4-205ENST00000581487 KRTAP4-7Q9BYR0 210 aa2.43□□□□□ -2.02
CMTM4-205ENST00000581487 MT1LQ93083 61 aa2.39□□□□□ -2.03
CMTM4-205ENST00000581487 KRTAP9-2Q9BYQ4 174 aa2.39□□□□□ -2.03
CMTM4-205ENST00000581487 MUC2Q02817 5179 aa2.38□□□□□ -2.03
CMTM4-205ENST00000581487 MT1EP04732 61 aa2.36□□□□□ -2.03
CMTM4-205ENST00000581487 FSIP2Q5CZC0 6907 aa2.36□□□□□ -2.03
CMTM4-205ENST00000581487 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
CMTM4-205ENST00000581487 USH2AO75445 5202 aa2.31□□□□□ -2.04
CMTM4-205ENST00000581487 KRTAP20-1Q3LI63 56 aa2.28□□□□□ -2.05
CMTM4-205ENST00000581487 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.05
CMTM4-205ENST00000581487 KRTAP19-6Q3LI70 58 aa2.27□□□□□ -2.05
CMTM4-205ENST00000581487 MT1MQ8N339 61 aa2.27□□□□□ -2.05
CMTM4-205ENST00000581487 KRTAP9-6A0A140TA67 174 aa2.26□□□□□ -2.05
CMTM4-205ENST00000581487 LOC100996750A0A140TA64 210 aa2.26□□□□□ -2.05
CMTM4-205ENST00000581487 KRTAP2-3P0C7H8 128 aa2.25□□□□□ -2.05
CMTM4-205ENST00000581487 KRTAP2-4Q9BYR9 128 aa2.25□□□□□ -2.05
CMTM4-205ENST00000581487 KRTAP2-1Q9BYU5 128 aa2.25□□□□□ -2.05
CMTM4-205ENST00000581487 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
CMTM4-205ENST00000581487 KRTAP4-9Q9BYQ8 210 aa2.24□□□□□ -2.05
CMTM4-205ENST00000581487 MACF1Q9UPN3 7388 aaKnown RBP2.24□□□□□ -2.05
CMTM4-205ENST00000581487 KRTAP4-3Q9BYR4 195 aa2.24□□□□□ -2.05
CMTM4-205ENST00000581487 SYNE2Q8WXH0 6885 aaKnown RBP2.22□□□□□ -2.05
CMTM4-205ENST00000581487 KRTAP9-6A8MVA2 160 aa2.2□□□□□ -2.06
CMTM4-205ENST00000581487 KRTAP9-7A8MTY7 169 aa2.17□□□□□ -2.06
CMTM4-205ENST00000581487 MUC12Q9UKN1 5478 aa2.12□□□□□ -2.07
CMTM4-205ENST00000581487 MT1AP04731 61 aa2.12□□□□□ -2.07
CMTM4-205ENST00000581487 OBSCNQ5VST9 7968 aa2.08□□□□□ -2.08
CMTM4-205ENST00000581487 NEBP20929 6669 aa2.08□□□□□ -2.08
CMTM4-205ENST00000581487 KRTAP6-2Q3LI66 62 aa2.07□□□□□ -2.08
CMTM4-205ENST00000581487 KRTAP9-9Q9BYP9 154 aa2.07□□□□□ -2.08
CMTM4-205ENST00000581487 KRTAP6-3Q3LI67 103 aa2.06□□□□□ -2.08
CMTM4-205ENST00000581487 FCGBPQ9Y6R7 5405 aaPredicted RBP2.06□□□□□ -2.08
CMTM4-205ENST00000581487 MDN1Q9NU22 5596 aa2.04□□□□□ -2.08
CMTM4-205ENST00000581487 KRTAP20-2Q3LI61 65 aa2.03□□□□□ -2.08
CMTM4-205ENST00000581487 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.02□□□□□ -2.09
CMTM4-205ENST00000581487 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
CMTM4-205ENST00000581487 KRTAP9-4Q9BYQ2 154 aa2□□□□□ -2.09
CMTM4-205ENST00000581487 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
CMTM4-205ENST00000581487 KRTAP2-2Q9BYT5 123 aa1.99□□□□□ -2.09
CMTM4-205ENST00000581487 KMT2DO14686 5537 aa1.96□□□□□ -2.1
CMTM4-205ENST00000581487 DSTQ03001 7570 aaKnown RBP1.94□□□□□ -2.1
CMTM4-205ENST00000581487 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
CMTM4-205ENST00000581487 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
CMTM4-205ENST00000581487 KRTAP4-11Q9BYQ6 195 aa1.85□□□□□ -2.11
CMTM4-205ENST00000581487 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
CMTM4-205ENST00000581487 KRTAP5-9P26371 169 aa1.79□□□□□ -2.12
CMTM4-205ENST00000581487 KRTAP4-2Q9BYR5 136 aa1.74□□□□□ -2.13
CMTM4-205ENST00000581487 KRTAP4-6Q9BYQ5 205 aa1.7□□□□□ -2.14
CMTM4-205ENST00000581487 KRTAP4-12Q9BQ66 201 aa1.69□□□□□ -2.14
CMTM4-205ENST00000581487 KRTAP5-5Q701N2 237 aaPredicted RBP1.67□□□□□ -2.14
CMTM4-205ENST00000581487 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
CMTM4-205ENST00000581487 MUC5ACP98088 5654 aa1.55□□□□□ -2.16
CMTM4-205ENST00000581487 KRTAP5-4Q6L8H1 288 aa1.51□□□□□ -2.17
CMTM4-205ENST00000581487 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
CMTM4-205ENST00000581487 KRTAP5-2Q701N4 177 aa1.33□□□□□ -2.2
CMTM4-205ENST00000581487 KRTAP5-3Q6L8H2 238 aa1.33□□□□□ -2.2
CMTM4-205ENST00000581487 KRTAP5-10Q6L8G5 202 aa1.29□□□□□ -2.2
CMTM4-205ENST00000581487 KRTAP5-8O75690 187 aa1.24□□□□□ -2.21
CMTM4-205ENST00000581487 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
CMTM4-205ENST00000581487 KRTAP5-1Q6L8H4 278 aa1.11□□□□□ -2.23
CMTM4-205ENST00000581487 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
CMTM4-205ENST00000581487 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.09□□□□□ -2.23
CMTM4-205ENST00000581487 KRTAP5-11Q6L8G4 156 aa1.09□□□□□ -2.24
CMTM4-205ENST00000581487 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
CMTM4-205ENST00000581487 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 99.1 ms