RNA–Protein interactions for RNA: ENST00000580824.5

CDC6-204, Transcript of cell division cycle 6, humanhuman

TSL 3

Gene CDC6, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-204ENST00000580824 SPRR2EP22531 72 aa5.85□□□□□ -1.47
CDC6-204ENST00000580824 SPRR2BP35325 72 aa5.85□□□□□ -1.47
CDC6-204ENST00000580824 SPRR2AP35326 72 aa5.85□□□□□ -1.47
CDC6-204ENST00000580824 A6NED7 52 aa5.84□□□□□ -1.47
CDC6-204ENST00000580824 LCE1AQ5T7P2 110 aa5.84□□□□□ -1.47
CDC6-204ENST00000580824 KRTAP19-7Q3SYF9 63 aa5.78□□□□□ -1.48
CDC6-204ENST00000580824 MT1EP04732 61 aa5.72□□□□□ -1.49
CDC6-204ENST00000580824 KRTAP20-1Q3LI63 56 aa5.71□□□□□ -1.5
CDC6-204ENST00000580824 KRTAP25-1Q3LHN0 102 aa5.69□□□□□ -1.5
CDC6-204ENST00000580824 KRTAP19-5Q3LI72 72 aa5.68□□□□□ -1.5
CDC6-204ENST00000580824 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
CDC6-204ENST00000580824 CDC42SE1Q9NRR8 79 aa5.68□□□□□ -1.5
CDC6-204ENST00000580824 KRTAP2-3P0C7H8 128 aa5.66□□□□□ -1.5
CDC6-204ENST00000580824 SPRR2DP22532 72 aa5.66□□□□□ -1.5
CDC6-204ENST00000580824 KRTAP2-4Q9BYR9 128 aa5.66□□□□□ -1.5
CDC6-204ENST00000580824 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
CDC6-204ENST00000580824 KRTAP23-1A1A580 65 aa5.54□□□□□ -1.52
CDC6-204ENST00000580824 MT1GP13640 62 aa5.53□□□□□ -1.52
CDC6-204ENST00000580824 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
CDC6-204ENST00000580824 MT1LQ93083 61 aa5.51□□□□□ -1.53
CDC6-204ENST00000580824 ROMO1P60602 79 aa5.5□□□□□ -1.53
CDC6-204ENST00000580824 KRTAP2-2Q9BYT5 123 aa5.5□□□□□ -1.53
CDC6-204ENST00000580824 KRTAP2-1Q9BYU5 128 aa5.5□□□□□ -1.53
CDC6-204ENST00000580824 PP632Q6XCG6 107 aa5.49□□□□□ -1.53
CDC6-204ENST00000580824 MT1MQ8N339 61 aa5.42□□□□□ -1.54
CDC6-204ENST00000580824 DSTQ03001 7570 aaKnown RBP5.33□□□□□ -1.56
CDC6-204ENST00000580824 BRK1Q8WUW1 75 aa5.31□□□□□ -1.56
CDC6-204ENST00000580824 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
CDC6-204ENST00000580824 KRTAP4-3Q9BYR4 195 aa5.21□□□□□ -1.58
CDC6-204ENST00000580824 LCE3CQ5T5A8 94 aa5.1□□□□□ -1.59
CDC6-204ENST00000580824 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
CDC6-204ENST00000580824 PMAIP1Q13794 54 aa5.02□□□□□ -1.61
CDC6-204ENST00000580824 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
CDC6-204ENST00000580824 PRO0628Q9UI54 55 aa4.92□□□□□ -1.62
CDC6-204ENST00000580824 MT4P47944 62 aa4.89□□□□□ -1.63
CDC6-204ENST00000580824 HMCN1Q96RW7 5635 aa4.89□□□□□ -1.63
CDC6-204ENST00000580824 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
CDC6-204ENST00000580824 SPRR5A0A1B0GTR4 108 aa4.76□□□□□ -1.65
CDC6-204ENST00000580824 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
CDC6-204ENST00000580824 PRAC1Q96KF2 57 aa4.72□□□□□ -1.65
CDC6-204ENST00000580824 MT1AP04731 61 aa4.71□□□□□ -1.66
CDC6-204ENST00000580824 SYNE1Q8NF91 8797 aaKnown RBP4.71□□□□□ -1.66
CDC6-204ENST00000580824 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
CDC6-204ENST00000580824 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
CDC6-204ENST00000580824 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
CDC6-204ENST00000580824 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
CDC6-204ENST00000580824 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
CDC6-204ENST00000580824 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.55□□□□□ -1.68
CDC6-204ENST00000580824 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
CDC6-204ENST00000580824 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
CDC6-204ENST00000580824 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
CDC6-204ENST00000580824 KRTAP6-2Q3LI66 62 aa4.36□□□□□ -1.71
CDC6-204ENST00000580824 SVIPQ8NHG7 77 aa4.35□□□□□ -1.71
CDC6-204ENST00000580824 MT3P25713 68 aa4.29□□□□□ -1.72
CDC6-204ENST00000580824 KRTAP5-7Q6L8G8 165 aa4.29□□□□□ -1.72
CDC6-204ENST00000580824 KRTAP5-8O75690 187 aa4.08□□□□□ -1.76
CDC6-204ENST00000580824 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
CDC6-204ENST00000580824 A0A0A0MQY5 61 aa4.05□□□□□ -1.76
CDC6-204ENST00000580824 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
CDC6-204ENST00000580824 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
CDC6-204ENST00000580824 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
CDC6-204ENST00000580824 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
CDC6-204ENST00000580824 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
CDC6-204ENST00000580824 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
CDC6-204ENST00000580824 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
CDC6-204ENST00000580824 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
CDC6-204ENST00000580824 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
CDC6-204ENST00000580824 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
CDC6-204ENST00000580824 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
CDC6-204ENST00000580824 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
CDC6-204ENST00000580824 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
CDC6-204ENST00000580824 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
CDC6-204ENST00000580824 INE1O15225 51 aa2.88□□□□□ -1.95
CDC6-204ENST00000580824 PRM1P04553 51 aa2.8□□□□□ -1.96
CDC6-204ENST00000580824 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
CDC6-204ENST00000580824 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
CDC6-204ENST00000580824 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
CDC6-204ENST00000580824 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 116.7 ms