RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 P0C880 135 aa3.13□□□□□ -1.91
SMARCE1-217ENST00000580654 CSAG1Q6PB30 78 aa3.12□□□□□ -1.91
SMARCE1-217ENST00000580654 CHKB-CPT1BH3BT56 60 aa3.1□□□□□ -1.91
SMARCE1-217ENST00000580654 DMAC1Q96GE9 116 aa3.1□□□□□ -1.91
SMARCE1-217ENST00000580654 MRPL34Q9BQ48 92 aaKnown RBP3.1□□□□□ -1.91
SMARCE1-217ENST00000580654 CRIPTQ9P021 101 aa3.1□□□□□ -1.91
SMARCE1-217ENST00000580654 S4R3F8 94 aa3.1□□□□□ -1.91
SMARCE1-217ENST00000580654 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
SMARCE1-217ENST00000580654 KRTAP10-12P60413 245 aa3.09□□□□□ -1.91
SMARCE1-217ENST00000580654 NREPQ16612 68 aa3.08□□□□□ -1.92
SMARCE1-217ENST00000580654 R4GN34 69 aa3.08□□□□□ -1.92
SMARCE1-217ENST00000580654 C20orf197Q8N268 126 aa3.07□□□□□ -1.92
SMARCE1-217ENST00000580654 MMP24-AS1A0A0U1RRL7 71 aa3.06□□□□□ -1.92
SMARCE1-217ENST00000580654 MT4P47944 62 aa3.06□□□□□ -1.92
SMARCE1-217ENST00000580654 LOC101927531A0A1B0GV80 90 aa3.05□□□□□ -1.92
SMARCE1-217ENST00000580654 JMJD7-PLA2G4BH0Y9G9 81 aa3.05□□□□□ -1.92
SMARCE1-217ENST00000580654 PDE6GP18545 87 aa3.04□□□□□ -1.92
SMARCE1-217ENST00000580654 LOC110117498A0A087WWA1 95 aa3.03□□□□□ -1.92
SMARCE1-217ENST00000580654 K7EQZ3 153 aa3.02□□□□□ -1.93
SMARCE1-217ENST00000580654 ATXN8Q156A1 80 aa3.02□□□□□ -1.93
SMARCE1-217ENST00000580654 ATP5EP2Q5VTU8 51 aa3.02□□□□□ -1.93
SMARCE1-217ENST00000580654 PLAC4Q8WY50 150 aa2.99□□□□□ -1.93
SMARCE1-217ENST00000580654 A8MU10 97 aa2.98□□□□□ -1.93
SMARCE1-217ENST00000580654 A0A087WVE0 104 aa2.95□□□□□ -1.94
SMARCE1-217ENST00000580654 Q8N9L7 120 aa2.95□□□□□ -1.94
SMARCE1-217ENST00000580654 KRTAP19-3Q7Z4W3 81 aa2.93□□□□□ -1.94
SMARCE1-217ENST00000580654 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
SMARCE1-217ENST00000580654 PRR15LQ9BU68 103 aa2.92□□□□□ -1.94
SMARCE1-217ENST00000580654 H0YAA0 97 aa2.91□□□□□ -1.94
SMARCE1-217ENST00000580654 KRTAP19-7Q3SYF9 63 aa2.9□□□□□ -1.95
SMARCE1-217ENST00000580654 LINC01558Q9Y6Z2 57 aa2.9□□□□□ -1.95
SMARCE1-217ENST00000580654 UQCR11O14957 56 aa2.88□□□□□ -1.95
SMARCE1-217ENST00000580654 MT1EP04732 61 aa2.88□□□□□ -1.95
SMARCE1-217ENST00000580654 TP53AIP1Q9HCN2 124 aa2.85□□□□□ -1.95
SMARCE1-217ENST00000580654 SNURFQ9Y675 71 aa2.85□□□□□ -1.95
SMARCE1-217ENST00000580654 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
SMARCE1-217ENST00000580654 UBL5Q9BZL1 73 aa2.84□□□□□ -1.95
SMARCE1-217ENST00000580654 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
SMARCE1-217ENST00000580654 LCE3AQ5TA76 89 aa2.81□□□□□ -1.96
SMARCE1-217ENST00000580654 INE1O15225 51 aa2.8□□□□□ -1.96
SMARCE1-217ENST00000580654 H0Y9P7 68 aa2.79□□□□□ -1.96
SMARCE1-217ENST00000580654 MT1GP13640 62 aa2.79□□□□□ -1.96
SMARCE1-217ENST00000580654 M0QZ58 72 aa2.78□□□□□ -1.96
SMARCE1-217ENST00000580654 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
SMARCE1-217ENST00000580654 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.97
SMARCE1-217ENST00000580654 MT1MQ8N339 61 aa2.77□□□□□ -1.97
SMARCE1-217ENST00000580654 SPATA8Q6RVD6 105 aa2.76□□□□□ -1.97
SMARCE1-217ENST00000580654 LINC00208Q96KT6 92 aa2.76□□□□□ -1.97
SMARCE1-217ENST00000580654 COA5Q86WW8 74 aa2.74□□□□□ -1.97
SMARCE1-217ENST00000580654 PP632Q6XCG6 107 aa2.73□□□□□ -1.97
SMARCE1-217ENST00000580654 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
SMARCE1-217ENST00000580654 ACYP2P14621 99 aa2.7□□□□□ -1.98
SMARCE1-217ENST00000580654 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
SMARCE1-217ENST00000580654 KRTAP19-5Q3LI72 72 aa2.68□□□□□ -1.98
SMARCE1-217ENST00000580654 MT1LQ93083 61 aa2.67□□□□□ -1.98
SMARCE1-217ENST00000580654 A0A1B0GU69 56 aa2.62□□□□□ -1.99
SMARCE1-217ENST00000580654 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
SMARCE1-217ENST00000580654 KRTAP12-4P60329 112 aa2.58□□□□□ -2
SMARCE1-217ENST00000580654 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
SMARCE1-217ENST00000580654 A0A0D9SG42 100 aa2.55□□□□□ -2
SMARCE1-217ENST00000580654 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
SMARCE1-217ENST00000580654 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
SMARCE1-217ENST00000580654 KRTAP13-4Q3LI77 160 aa2.44□□□□□ -2.02
SMARCE1-217ENST00000580654 C10orf95Q9H7T3 257 aa2.44□□□□□ -2.02
SMARCE1-217ENST00000580654 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
SMARCE1-217ENST00000580654 KRTAP12-1P59990 96 aa2.3□□□□□ -2.04
SMARCE1-217ENST00000580654 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
SMARCE1-217ENST00000580654 TNP1P09430 55 aa2.28□□□□□ -2.04
SMARCE1-217ENST00000580654 KRTAP12-3P60328 96 aa2.27□□□□□ -2.05
SMARCE1-217ENST00000580654 MT1AP04731 61 aa2.26□□□□□ -2.05
SMARCE1-217ENST00000580654 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
SMARCE1-217ENST00000580654 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
SMARCE1-217ENST00000580654 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
SMARCE1-217ENST00000580654 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.11
SMARCE1-217ENST00000580654 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
SMARCE1-217ENST00000580654 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
SMARCE1-217ENST00000580654 PRM1P04553 51 aa1.25□□□□□ -2.21
SMARCE1-217ENST00000580654 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 17.6 ms