RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TNP1P09430 55 aa6.19□□□□□ -1.42
MKS1-209ENST00000580127 KRTAP4-3Q9BYR4 195 aa6.18□□□□□ -1.42
MKS1-209ENST00000580127 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
MKS1-209ENST00000580127 LCE3AQ5TA76 89 aa6.14□□□□□ -1.43
MKS1-209ENST00000580127 A0A1B0GU69 56 aa6.08□□□□□ -1.44
MKS1-209ENST00000580127 KRTAP5-7Q6L8G8 165 aa6.08□□□□□ -1.44
MKS1-209ENST00000580127 KRTAP5-3Q6L8H2 238 aa6.04□□□□□ -1.44
MKS1-209ENST00000580127 A8MU10 97 aa6.01□□□□□ -1.45
MKS1-209ENST00000580127 KRTAP12-3P60328 96 aa5.96□□□□□ -1.46
MKS1-209ENST00000580127 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
MKS1-209ENST00000580127 COX7CP15954 63 aa5.94□□□□□ -1.46
MKS1-209ENST00000580127 KRTAP12-4P60329 112 aa5.94□□□□□ -1.46
MKS1-209ENST00000580127 KRTAP20-2Q3LI61 65 aa5.94□□□□□ -1.46
MKS1-209ENST00000580127 KRTAP4-7Q9BYR0 210 aa5.93□□□□□ -1.46
MKS1-209ENST00000580127 H7BZZ5 65 aa5.9□□□□□ -1.46
MKS1-209ENST00000580127 PRR15LQ9BU68 103 aa5.86□□□□□ -1.47
MKS1-209ENST00000580127 KRTAP5-5Q701N2 237 aaPredicted RBP5.83□□□□□ -1.48
MKS1-209ENST00000580127 KRTAP19-4Q3LI73 84 aa5.74□□□□□ -1.49
MKS1-209ENST00000580127 KRTAP25-1Q3LHN0 102 aa5.66□□□□□ -1.5
MKS1-209ENST00000580127 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
MKS1-209ENST00000580127 UQCR11O14957 56 aa5.61□□□□□ -1.51
MKS1-209ENST00000580127 LINC01558Q9Y6Z2 57 aa5.6□□□□□ -1.51
MKS1-209ENST00000580127 ATP5EP56381 51 aaPredicted RBP5.56□□□□□ -1.52
MKS1-209ENST00000580127 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
MKS1-209ENST00000580127 ANAPC13Q9BS18 74 aa5.56□□□□□ -1.52
MKS1-209ENST00000580127 KRTAP4-11Q9BYQ6 195 aa5.54□□□□□ -1.52
MKS1-209ENST00000580127 V9GYY9 64 aa5.53□□□□□ -1.52
MKS1-209ENST00000580127 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
MKS1-209ENST00000580127 K7ERS5 55 aa5.52□□□□□ -1.53
MKS1-209ENST00000580127 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
MKS1-209ENST00000580127 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.54
MKS1-209ENST00000580127 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
MKS1-209ENST00000580127 KRTAP5-2Q701N4 177 aa5.4□□□□□ -1.54
MKS1-209ENST00000580127 MT1AP04731 61 aa5.38□□□□□ -1.55
MKS1-209ENST00000580127 CCDC179H3BU77 68 aa5.37□□□□□ -1.55
MKS1-209ENST00000580127 KRTAP6-1Q3LI64 71 aa5.33□□□□□ -1.56
MKS1-209ENST00000580127 KRTAP5-8O75690 187 aa5.31□□□□□ -1.56
MKS1-209ENST00000580127 AHNAKQ09666 5890 aaKnown RBP5.29□□□□□ -1.56
MKS1-209ENST00000580127 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
MKS1-209ENST00000580127 MUC5ACP98088 5654 aa5.25□□□□□ -1.57
MKS1-209ENST00000580127 TMEM258P61165 79 aa5.22□□□□□ -1.57
MKS1-209ENST00000580127 KRTAP9-9Q9BYP9 154 aa5.22□□□□□ -1.57
MKS1-209ENST00000580127 KRTAP6-2Q3LI66 62 aa5.2□□□□□ -1.58
MKS1-209ENST00000580127 MUC5BQ9HC84 5762 aaPredicted RBP5.17□□□□□ -1.58
MKS1-209ENST00000580127 RPS28P62857 69 aaKnown RBP5.14□□□□□ -1.59
MKS1-209ENST00000580127 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
MKS1-209ENST00000580127 CDC42SE1Q9NRR8 79 aa5.09□□□□□ -1.59
MKS1-209ENST00000580127 PSPHP1O15172 72 aa5.08□□□□□ -1.6
MKS1-209ENST00000580127 Q1T7F1 81 aa5.05□□□□□ -1.6
MKS1-209ENST00000580127 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
MKS1-209ENST00000580127 MT3P25713 68 aa5.01□□□□□ -1.61
MKS1-209ENST00000580127 ROMO1P60602 79 aa4.95□□□□□ -1.62
MKS1-209ENST00000580127 A6NED7 52 aa4.94□□□□□ -1.62
MKS1-209ENST00000580127 PRO0628Q9UI54 55 aa4.94□□□□□ -1.62
MKS1-209ENST00000580127 NDUFAF8A1L188 74 aa4.93□□□□□ -1.62
MKS1-209ENST00000580127 KRTAP5-1Q6L8H4 278 aa4.91□□□□□ -1.62
MKS1-209ENST00000580127 PMAIP1Q13794 54 aa4.71□□□□□ -1.66
MKS1-209ENST00000580127 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
MKS1-209ENST00000580127 LUZP6Q538Z0 58 aa4.59□□□□□ -1.67
MKS1-209ENST00000580127 KRTAP4-12Q9BQ66 201 aa4.58□□□□□ -1.68
MKS1-209ENST00000580127 BRK1Q8WUW1 75 aa4.49□□□□□ -1.69
MKS1-209ENST00000580127 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
MKS1-209ENST00000580127 KRTAP4-2Q9BYR5 136 aa4.35□□□□□ -1.71
MKS1-209ENST00000580127 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
MKS1-209ENST00000580127 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
MKS1-209ENST00000580127 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
MKS1-209ENST00000580127 KRTAP5-11Q6L8G4 156 aa3.91□□□□□ -1.78
MKS1-209ENST00000580127 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
MKS1-209ENST00000580127 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
MKS1-209ENST00000580127 PHGR1C9JFL3 82 aa3.7□□□□□ -1.82
MKS1-209ENST00000580127 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
MKS1-209ENST00000580127 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
MKS1-209ENST00000580127 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
MKS1-209ENST00000580127 INE1O15225 51 aa3.19□□□□□ -1.9
MKS1-209ENST00000580127 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
MKS1-209ENST00000580127 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
MKS1-209ENST00000580127 PRM1P04553 51 aa2.46□□□□□ -2.02
MKS1-209ENST00000580127 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 146 ms