RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 UQCR11O14957 56 aa2.23□□□□□ -2.05
PTPRM-207ENST00000578571 LINC01554Q52M75 96 aa2.22□□□□□ -2.05
PTPRM-207ENST00000578571 PLAC4Q8WY50 150 aa2.22□□□□□ -2.05
PTPRM-207ENST00000578571 KTN1-AS1Q86SY8 53 aa2.2□□□□□ -2.06
PTPRM-207ENST00000578571 A6NN06 94 aa2.19□□□□□ -2.06
PTPRM-207ENST00000578571 K7ERS5 55 aa2.19□□□□□ -2.06
PTPRM-207ENST00000578571 PSPHP1O15172 72 aa2.19□□□□□ -2.06
PTPRM-207ENST00000578571 A6NED7 52 aa2.18□□□□□ -2.06
PTPRM-207ENST00000578571 KRTAP19-8Q3LI54 63 aa2.18□□□□□ -2.06
PTPRM-207ENST00000578571 MIR22HGQ0VDD5 57 aa2.17□□□□□ -2.06
PTPRM-207ENST00000578571 PRO2289Q9P1D8 64 aa2.17□□□□□ -2.06
PTPRM-207ENST00000578571 A0A0D9SG42 100 aa2.16□□□□□ -2.06
PTPRM-207ENST00000578571 SPATA8Q6RVD6 105 aa2.16□□□□□ -2.06
PTPRM-207ENST00000578571 SPINT4Q6UDR6 99 aa2.15□□□□□ -2.07
PTPRM-207ENST00000578571 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
PTPRM-207ENST00000578571 KRTAP13-4Q3LI77 160 aa2.13□□□□□ -2.07
PTPRM-207ENST00000578571 CRCT1Q9UGL9 99 aa2.13□□□□□ -2.07
PTPRM-207ENST00000578571 MT1BP07438 61 aa2.12□□□□□ -2.07
PTPRM-207ENST00000578571 KRTAP19-6Q3LI70 58 aa2.11□□□□□ -2.07
PTPRM-207ENST00000578571 CDC42SE1Q9NRR8 79 aa2.1□□□□□ -2.07
PTPRM-207ENST00000578571 FSIP2Q5CZC0 6907 aa2.1□□□□□ -2.07
PTPRM-207ENST00000578571 KRTAP12-1P59990 96 aa2.09□□□□□ -2.07
PTPRM-207ENST00000578571 USH2AO75445 5202 aa2.04□□□□□ -2.08
PTPRM-207ENST00000578571 TNP1P09430 55 aa2.03□□□□□ -2.08
PTPRM-207ENST00000578571 MT1XP80297 61 aa2.03□□□□□ -2.08
PTPRM-207ENST00000578571 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
PTPRM-207ENST00000578571 KRTAP12-3P60328 96 aa2.01□□□□□ -2.09
PTPRM-207ENST00000578571 KRTAP6-3Q3LI67 103 aa2.01□□□□□ -2.09
PTPRM-207ENST00000578571 SSPOA2VEC9 5147 aa2□□□□□ -2.09
PTPRM-207ENST00000578571 ROMO1P60602 79 aa1.99□□□□□ -2.09
PTPRM-207ENST00000578571 KRTAP25-1Q3LHN0 102 aa1.99□□□□□ -2.09
PTPRM-207ENST00000578571 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
PTPRM-207ENST00000578571 MACF1Q9UPN3 7388 aaKnown RBP1.97□□□□□ -2.09
PTPRM-207ENST00000578571 LUZP6Q538Z0 58 aa1.97□□□□□ -2.09
PTPRM-207ENST00000578571 C10orf95Q9H7T3 257 aa1.96□□□□□ -2.1
PTPRM-207ENST00000578571 FCGBPQ9Y6R7 5405 aaPredicted RBP1.95□□□□□ -2.1
PTPRM-207ENST00000578571 KRTAP8-1Q8IUC2 63 aa1.94□□□□□ -2.1
PTPRM-207ENST00000578571 SYNE2Q8WXH0 6885 aaKnown RBP1.9□□□□□ -2.11
PTPRM-207ENST00000578571 SPRR2FQ96RM1 72 aa1.88□□□□□ -2.11
PTPRM-207ENST00000578571 SPRR2EP22531 72 aa1.82□□□□□ -2.12
PTPRM-207ENST00000578571 SPRR2BP35325 72 aa1.82□□□□□ -2.12
PTPRM-207ENST00000578571 SPRR2AP35326 72 aa1.82□□□□□ -2.12
PTPRM-207ENST00000578571 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
PTPRM-207ENST00000578571 KRTAP19-5Q3LI72 72 aa1.82□□□□□ -2.12
PTPRM-207ENST00000578571 KMT2DO14686 5537 aa1.8□□□□□ -2.12
PTPRM-207ENST00000578571 MT1EP04732 61 aa1.8□□□□□ -2.12
PTPRM-207ENST00000578571 KRTAP19-7Q3SYF9 63 aa1.8□□□□□ -2.12
PTPRM-207ENST00000578571 KRTAP19-3Q7Z4W3 81 aa1.79□□□□□ -2.12
PTPRM-207ENST00000578571 MT1GP13640 62 aa1.78□□□□□ -2.12
PTPRM-207ENST00000578571 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
PTPRM-207ENST00000578571 NEBP20929 6669 aa1.76□□□□□ -2.13
PTPRM-207ENST00000578571 SPRR2DP22532 72 aa1.76□□□□□ -2.13
PTPRM-207ENST00000578571 MT1LQ93083 61 aa1.75□□□□□ -2.13
PTPRM-207ENST00000578571 MUC12Q9UKN1 5478 aa1.73□□□□□ -2.13
PTPRM-207ENST00000578571 KRTAP2-3P0C7H8 128 aa1.71□□□□□ -2.14
PTPRM-207ENST00000578571 KRTAP20-1Q3LI63 56 aa1.71□□□□□ -2.14
PTPRM-207ENST00000578571 MT1MQ8N339 61 aa1.71□□□□□ -2.14
PTPRM-207ENST00000578571 KRTAP2-4Q9BYR9 128 aa1.71□□□□□ -2.14
PTPRM-207ENST00000578571 MDN1Q9NU22 5596 aa1.68□□□□□ -2.14
PTPRM-207ENST00000578571 KRTAP2-1Q9BYU5 128 aa1.67□□□□□ -2.14
PTPRM-207ENST00000578571 DSTQ03001 7570 aaKnown RBP1.63□□□□□ -2.15
PTPRM-207ENST00000578571 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
PTPRM-207ENST00000578571 INE1O15225 51 aa1.54□□□□□ -2.16
PTPRM-207ENST00000578571 MT1AP04731 61 aa1.52□□□□□ -2.17
PTPRM-207ENST00000578571 MT4P47944 62 aa1.51□□□□□ -2.17
PTPRM-207ENST00000578571 KRTAP6-1Q3LI64 71 aa1.46□□□□□ -2.18
PTPRM-207ENST00000578571 SYNE1Q8NF91 8797 aaKnown RBP1.45□□□□□ -2.18
PTPRM-207ENST00000578571 KRTAP20-2Q3LI61 65 aa1.44□□□□□ -2.18
PTPRM-207ENST00000578571 KRTAP6-2Q3LI66 62 aa1.38□□□□□ -2.19
PTPRM-207ENST00000578571 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
PTPRM-207ENST00000578571 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.2
PTPRM-207ENST00000578571 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
PTPRM-207ENST00000578571 MUC5BQ9HC84 5762 aaPredicted RBP1.12□□□□□ -2.23
PTPRM-207ENST00000578571 MUC5ACP98088 5654 aa1.1□□□□□ -2.23
PTPRM-207ENST00000578571 PRM1P04553 51 aa1□□□□□ -2.25
PTPRM-207ENST00000578571 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
PTPRM-207ENST00000578571 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
PTPRM-207ENST00000578571 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms