RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 MT1EP04732 61 aa4.68□□□□□ -1.66
SMARCD2-207ENST00000578234 C10orf95Q9H7T3 257 aa4.68□□□□□ -1.66
SMARCD2-207ENST00000578234 K7ERS5 55 aa4.61□□□□□ -1.67
SMARCD2-207ENST00000578234 MT4P47944 62 aa4.61□□□□□ -1.67
SMARCD2-207ENST00000578234 TNP1P09430 55 aa4.6□□□□□ -1.67
SMARCD2-207ENST00000578234 LCE1DQ5T752 114 aa4.6□□□□□ -1.67
SMARCD2-207ENST00000578234 MT1GP13640 62 aa4.58□□□□□ -1.68
SMARCD2-207ENST00000578234 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
SMARCD2-207ENST00000578234 PP632Q6XCG6 107 aa4.54□□□□□ -1.68
SMARCD2-207ENST00000578234 LCE3AQ5TA76 89 aa4.52□□□□□ -1.69
SMARCD2-207ENST00000578234 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
SMARCD2-207ENST00000578234 HMCN1Q96RW7 5635 aa4.5□□□□□ -1.69
SMARCD2-207ENST00000578234 MT1MQ8N339 61 aa4.48□□□□□ -1.69
SMARCD2-207ENST00000578234 CDC42SE1Q9NRR8 79 aa4.48□□□□□ -1.69
SMARCD2-207ENST00000578234 AHNAK2Q8IVF2 5795 aa4.45□□□□□ -1.7
SMARCD2-207ENST00000578234 MT1LQ93083 61 aa4.44□□□□□ -1.7
SMARCD2-207ENST00000578234 KRTAP25-1Q3LHN0 102 aa4.43□□□□□ -1.7
SMARCD2-207ENST00000578234 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
SMARCD2-207ENST00000578234 KRTAP4-3Q9BYR4 195 aa4.4□□□□□ -1.71
SMARCD2-207ENST00000578234 KRTAP4-6Q9BYQ5 205 aa4.37□□□□□ -1.71
SMARCD2-207ENST00000578234 ROMO1P60602 79 aa4.35□□□□□ -1.71
SMARCD2-207ENST00000578234 KRTAP5-10Q6L8G5 202 aa4.34□□□□□ -1.71
SMARCD2-207ENST00000578234 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
SMARCD2-207ENST00000578234 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
SMARCD2-207ENST00000578234 H3BS24 57 aa4.25□□□□□ -1.73
SMARCD2-207ENST00000578234 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
SMARCD2-207ENST00000578234 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
SMARCD2-207ENST00000578234 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
SMARCD2-207ENST00000578234 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
SMARCD2-207ENST00000578234 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.74
SMARCD2-207ENST00000578234 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
SMARCD2-207ENST00000578234 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
SMARCD2-207ENST00000578234 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
SMARCD2-207ENST00000578234 KRTAP12-4P60329 112 aa4.11□□□□□ -1.75
SMARCD2-207ENST00000578234 LOC100996750A0A140TA64 210 aa4.09□□□□□ -1.75
SMARCD2-207ENST00000578234 PMAIP1Q13794 54 aa4.03□□□□□ -1.76
SMARCD2-207ENST00000578234 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
SMARCD2-207ENST00000578234 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
SMARCD2-207ENST00000578234 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
SMARCD2-207ENST00000578234 PRO0628Q9UI54 55 aa3.89□□□□□ -1.79
SMARCD2-207ENST00000578234 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
SMARCD2-207ENST00000578234 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
SMARCD2-207ENST00000578234 KRTAP5-2Q701N4 177 aa3.82□□□□□ -1.8
SMARCD2-207ENST00000578234 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
SMARCD2-207ENST00000578234 KRTAP9-6A8MVA2 160 aa3.79□□□□□ -1.8
SMARCD2-207ENST00000578234 MT1AP04731 61 aa3.78□□□□□ -1.8
SMARCD2-207ENST00000578234 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
SMARCD2-207ENST00000578234 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
SMARCD2-207ENST00000578234 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
SMARCD2-207ENST00000578234 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.81
SMARCD2-207ENST00000578234 KTN1-AS1Q86SY8 53 aa3.68□□□□□ -1.82
SMARCD2-207ENST00000578234 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
SMARCD2-207ENST00000578234 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
SMARCD2-207ENST00000578234 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
SMARCD2-207ENST00000578234 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
SMARCD2-207ENST00000578234 KRTAP9-9Q9BYP9 154 aa3.64□□□□□ -1.83
SMARCD2-207ENST00000578234 KRTAP4-12Q9BQ66 201 aa3.53□□□□□ -1.84
SMARCD2-207ENST00000578234 MT3P25713 68 aa3.48□□□□□ -1.85
SMARCD2-207ENST00000578234 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
SMARCD2-207ENST00000578234 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
SMARCD2-207ENST00000578234 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
SMARCD2-207ENST00000578234 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
SMARCD2-207ENST00000578234 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
SMARCD2-207ENST00000578234 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
SMARCD2-207ENST00000578234 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
SMARCD2-207ENST00000578234 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
SMARCD2-207ENST00000578234 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
SMARCD2-207ENST00000578234 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
SMARCD2-207ENST00000578234 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
SMARCD2-207ENST00000578234 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
SMARCD2-207ENST00000578234 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
SMARCD2-207ENST00000578234 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
SMARCD2-207ENST00000578234 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
SMARCD2-207ENST00000578234 INE1O15225 51 aa2.3□□□□□ -2.04
SMARCD2-207ENST00000578234 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
SMARCD2-207ENST00000578234 PRM1P04553 51 aa2.27□□□□□ -2.05
SMARCD2-207ENST00000578234 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
SMARCD2-207ENST00000578234 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms