RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 PKHD1L1Q86WI1 4243 aa3.23□□□□□ -1.89
SEC22B-201ENST00000578049 KRTAP19-7Q3SYF9 63 aa3.2□□□□□ -1.9
SEC22B-201ENST00000578049 MT1AP04731 61 aa3.19□□□□□ -1.9
SEC22B-201ENST00000578049 LCE2DQ5TA82 110 aaPredicted RBP3.14□□□□□ -1.91
SEC22B-201ENST00000578049 RNF213Q63HN8 5207 aa3.08□□□□□ -1.92
SEC22B-201ENST00000578049 LOC100996750A0A140TA64 210 aa3.08□□□□□ -1.92
SEC22B-201ENST00000578049 PKHD1P08F94 4074 aa3.06□□□□□ -1.92
SEC22B-201ENST00000578049 HMCN2Q8NDA2 5059 aa3.06□□□□□ -1.92
SEC22B-201ENST00000578049 UBR4Q5T4S7 5183 aa3.04□□□□□ -1.92
SEC22B-201ENST00000578049 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
SEC22B-201ENST00000578049 LCE2AQ5TA79 106 aaPredicted RBP3.02□□□□□ -1.93
SEC22B-201ENST00000578049 TNXBP22105 4242 aa3□□□□□ -1.93
SEC22B-201ENST00000578049 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
SEC22B-201ENST00000578049 LPAP08519 4548 aa2.98□□□□□ -1.93
SEC22B-201ENST00000578049 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
SEC22B-201ENST00000578049 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
SEC22B-201ENST00000578049 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
SEC22B-201ENST00000578049 LCE1DQ5T752 114 aa2.94□□□□□ -1.94
SEC22B-201ENST00000578049 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
SEC22B-201ENST00000578049 MT4P47944 62 aa2.92□□□□□ -1.94
SEC22B-201ENST00000578049 KRTAP4-9Q9BYQ8 210 aa2.89□□□□□ -1.95
SEC22B-201ENST00000578049 LCE5AQ5TCM9 118 aa2.88□□□□□ -1.95
SEC22B-201ENST00000578049 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
SEC22B-201ENST00000578049 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
SEC22B-201ENST00000578049 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
SEC22B-201ENST00000578049 MUC2Q02817 5179 aa2.83□□□□□ -1.96
SEC22B-201ENST00000578049 KRTAP9-2Q9BYQ4 174 aa2.82□□□□□ -1.96
SEC22B-201ENST00000578049 LCE4AQ5TA78 99 aa2.77□□□□□ -1.97
SEC22B-201ENST00000578049 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
SEC22B-201ENST00000578049 KRTAP9-7A8MTY7 169 aa2.71□□□□□ -1.98
SEC22B-201ENST00000578049 FSIP2Q5CZC0 6907 aa2.69□□□□□ -1.98
SEC22B-201ENST00000578049 KRTAP9-6A0A140TA67 174 aa2.66□□□□□ -1.98
SEC22B-201ENST00000578049 KRTAP2-2Q9BYT5 123 aa2.65□□□□□ -1.99
SEC22B-201ENST00000578049 USH2AO75445 5202 aa2.64□□□□□ -1.99
SEC22B-201ENST00000578049 SYNE2Q8WXH0 6885 aaKnown RBP2.63□□□□□ -1.99
SEC22B-201ENST00000578049 KRTAP20-1Q3LI63 56 aa2.61□□□□□ -1.99
SEC22B-201ENST00000578049 FCGBPQ9Y6R7 5405 aaPredicted RBP2.59□□□□□ -1.99
SEC22B-201ENST00000578049 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.49□□□□□ -2.01
SEC22B-201ENST00000578049 SSPOA2VEC9 5147 aa2.48□□□□□ -2.01
SEC22B-201ENST00000578049 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
SEC22B-201ENST00000578049 MUC12Q9UKN1 5478 aa2.48□□□□□ -2.01
SEC22B-201ENST00000578049 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
SEC22B-201ENST00000578049 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
SEC22B-201ENST00000578049 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
SEC22B-201ENST00000578049 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
SEC22B-201ENST00000578049 KRTAP5-9P26371 169 aa2.43□□□□□ -2.02
SEC22B-201ENST00000578049 KMT2DO14686 5537 aa2.4□□□□□ -2.03
SEC22B-201ENST00000578049 MACF1Q9UPN3 7388 aaKnown RBP2.37□□□□□ -2.03
SEC22B-201ENST00000578049 KRTAP4-11Q9BYQ6 195 aa2.31□□□□□ -2.04
SEC22B-201ENST00000578049 MDN1Q9NU22 5596 aa2.31□□□□□ -2.04
SEC22B-201ENST00000578049 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
SEC22B-201ENST00000578049 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.05
SEC22B-201ENST00000578049 NEBP20929 6669 aa2.27□□□□□ -2.05
SEC22B-201ENST00000578049 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
SEC22B-201ENST00000578049 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
SEC22B-201ENST00000578049 KRTAP4-6Q9BYQ5 205 aa2.19□□□□□ -2.06
SEC22B-201ENST00000578049 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
SEC22B-201ENST00000578049 KRTAP5-3Q6L8H2 238 aa1.99□□□□□ -2.09
SEC22B-201ENST00000578049 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
SEC22B-201ENST00000578049 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
SEC22B-201ENST00000578049 HMCN1Q96RW7 5635 aa1.92□□□□□ -2.1
SEC22B-201ENST00000578049 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
SEC22B-201ENST00000578049 KRTAP4-12Q9BQ66 201 aa1.88□□□□□ -2.11
SEC22B-201ENST00000578049 KRTAP4-2Q9BYR5 136 aa1.88□□□□□ -2.11
SEC22B-201ENST00000578049 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
SEC22B-201ENST00000578049 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
SEC22B-201ENST00000578049 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
SEC22B-201ENST00000578049 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
SEC22B-201ENST00000578049 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
SEC22B-201ENST00000578049 KRTAP5-11Q6L8G4 156 aa1.62□□□□□ -2.15
SEC22B-201ENST00000578049 KRTAP5-8O75690 187 aa1.59□□□□□ -2.16
SEC22B-201ENST00000578049 KRTAP5-1Q6L8H4 278 aa1.52□□□□□ -2.17
SEC22B-201ENST00000578049 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
SEC22B-201ENST00000578049 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.51□□□□□ -2.17
SEC22B-201ENST00000578049 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
SEC22B-201ENST00000578049 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
SEC22B-201ENST00000578049 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 80.7 ms