RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 MT1GP13640 62 aa6.02□□□□□ -1.45
CDK5RAP3-206ENST00000578018 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
CDK5RAP3-206ENST00000578018 A6NED7 52 aa5.98□□□□□ -1.45
CDK5RAP3-206ENST00000578018 PP632Q6XCG6 107 aa5.97□□□□□ -1.45
CDK5RAP3-206ENST00000578018 LCE1DQ5T752 114 aa5.96□□□□□ -1.46
CDK5RAP3-206ENST00000578018 K7ERS5 55 aa5.95□□□□□ -1.46
CDK5RAP3-206ENST00000578018 MT1MQ8N339 61 aa5.94□□□□□ -1.46
CDK5RAP3-206ENST00000578018 TNP1P09430 55 aa5.92□□□□□ -1.46
CDK5RAP3-206ENST00000578018 MT1LQ93083 61 aa5.92□□□□□ -1.46
CDK5RAP3-206ENST00000578018 HMCN1Q96RW7 5635 aa5.92□□□□□ -1.46
CDK5RAP3-206ENST00000578018 LCE4AQ5TA78 99 aa5.89□□□□□ -1.47
CDK5RAP3-206ENST00000578018 MT4P47944 62 aa5.86□□□□□ -1.47
CDK5RAP3-206ENST00000578018 LCE3AQ5TA76 89 aa5.82□□□□□ -1.48
CDK5RAP3-206ENST00000578018 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
CDK5RAP3-206ENST00000578018 KRTAP4-3Q9BYR4 195 aa5.81□□□□□ -1.48
CDK5RAP3-206ENST00000578018 AHNAK2Q8IVF2 5795 aa5.8□□□□□ -1.48
CDK5RAP3-206ENST00000578018 KRTAP5-4Q6L8H1 288 aa5.78□□□□□ -1.48
CDK5RAP3-206ENST00000578018 KRTAP25-1Q3LHN0 102 aa5.77□□□□□ -1.49
CDK5RAP3-206ENST00000578018 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
CDK5RAP3-206ENST00000578018 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
CDK5RAP3-206ENST00000578018 KRTAP5-10Q6L8G5 202 aa5.64□□□□□ -1.51
CDK5RAP3-206ENST00000578018 ROMO1P60602 79 aa5.62□□□□□ -1.51
CDK5RAP3-206ENST00000578018 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
CDK5RAP3-206ENST00000578018 KRTAP12-3P60328 96 aa5.59□□□□□ -1.51
CDK5RAP3-206ENST00000578018 KRTAP5-5Q701N2 237 aaPredicted RBP5.48□□□□□ -1.53
CDK5RAP3-206ENST00000578018 BRK1Q8WUW1 75 aa5.47□□□□□ -1.53
CDK5RAP3-206ENST00000578018 KRTAP20-2Q3LI61 65 aa5.46□□□□□ -1.54
CDK5RAP3-206ENST00000578018 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
CDK5RAP3-206ENST00000578018 KRTAP5-7Q6L8G8 165 aa5.44□□□□□ -1.54
CDK5RAP3-206ENST00000578018 SPRR5A0A1B0GTR4 108 aa5.41□□□□□ -1.54
CDK5RAP3-206ENST00000578018 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
CDK5RAP3-206ENST00000578018 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
CDK5RAP3-206ENST00000578018 KRTAP12-4P60329 112 aa5.34□□□□□ -1.55
CDK5RAP3-206ENST00000578018 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
CDK5RAP3-206ENST00000578018 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
CDK5RAP3-206ENST00000578018 PMAIP1Q13794 54 aa5.18□□□□□ -1.58
CDK5RAP3-206ENST00000578018 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
CDK5RAP3-206ENST00000578018 PRO0628Q9UI54 55 aa5.1□□□□□ -1.59
CDK5RAP3-206ENST00000578018 KRTAP5-2Q701N4 177 aa5.04□□□□□ -1.6
CDK5RAP3-206ENST00000578018 MT1AP04731 61 aa5.03□□□□□ -1.6
CDK5RAP3-206ENST00000578018 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
CDK5RAP3-206ENST00000578018 KRTAP6-1Q3LI64 71 aa5.01□□□□□ -1.61
CDK5RAP3-206ENST00000578018 KRTAP9-6A8MVA2 160 aa4.88□□□□□ -1.63
CDK5RAP3-206ENST00000578018 PRAC1Q96KF2 57 aa4.88□□□□□ -1.63
CDK5RAP3-206ENST00000578018 KRTAP5-8O75690 187 aa4.87□□□□□ -1.63
CDK5RAP3-206ENST00000578018 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
CDK5RAP3-206ENST00000578018 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
CDK5RAP3-206ENST00000578018 AHNAKQ09666 5890 aaKnown RBP4.84□□□□□ -1.64
CDK5RAP3-206ENST00000578018 KRTAP6-2Q3LI66 62 aa4.82□□□□□ -1.64
CDK5RAP3-206ENST00000578018 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
CDK5RAP3-206ENST00000578018 MUC5BQ9HC84 5762 aaPredicted RBP4.79□□□□□ -1.64
CDK5RAP3-206ENST00000578018 KTN1-AS1Q86SY8 53 aa4.78□□□□□ -1.64
CDK5RAP3-206ENST00000578018 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
CDK5RAP3-206ENST00000578018 MT3P25713 68 aa4.59□□□□□ -1.67
CDK5RAP3-206ENST00000578018 KRTAP5-1Q6L8H4 278 aa4.55□□□□□ -1.68
CDK5RAP3-206ENST00000578018 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
CDK5RAP3-206ENST00000578018 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
CDK5RAP3-206ENST00000578018 LUZP6Q538Z0 58 aa4.1□□□□□ -1.75
CDK5RAP3-206ENST00000578018 KRTAP4-2Q9BYR5 136 aa4.07□□□□□ -1.76
CDK5RAP3-206ENST00000578018 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
CDK5RAP3-206ENST00000578018 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
CDK5RAP3-206ENST00000578018 LCE3DQ9BYE3 92 aa3.79□□□□□ -1.8
CDK5RAP3-206ENST00000578018 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
CDK5RAP3-206ENST00000578018 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
CDK5RAP3-206ENST00000578018 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
CDK5RAP3-206ENST00000578018 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
CDK5RAP3-206ENST00000578018 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
CDK5RAP3-206ENST00000578018 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
CDK5RAP3-206ENST00000578018 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
CDK5RAP3-206ENST00000578018 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
CDK5RAP3-206ENST00000578018 H3BS24 57 aa3.12□□□□□ -1.91
CDK5RAP3-206ENST00000578018 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
CDK5RAP3-206ENST00000578018 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
CDK5RAP3-206ENST00000578018 A0A0A0MQY5 61 aa2.99□□□□□ -1.93
CDK5RAP3-206ENST00000578018 INE1O15225 51 aa2.98□□□□□ -1.93
CDK5RAP3-206ENST00000578018 PRM1P04553 51 aa2.87□□□□□ -1.95
CDK5RAP3-206ENST00000578018 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
CDK5RAP3-206ENST00000578018 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms