RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 TNP1P09430 55 aa5.85□□□□□ -1.47
NCBP3-207ENST00000577169 MT1EP04732 61 aa5.82□□□□□ -1.48
NCBP3-207ENST00000577169 KRTAP19-5Q3LI72 72 aa5.8□□□□□ -1.48
NCBP3-207ENST00000577169 LCE4AQ5TA78 99 aa5.79□□□□□ -1.48
NCBP3-207ENST00000577169 RPS28P62857 69 aaKnown RBP5.76□□□□□ -1.49
NCBP3-207ENST00000577169 LCE3AQ5TA76 89 aa5.76□□□□□ -1.49
NCBP3-207ENST00000577169 KRTAP2-2Q9BYT5 123 aa5.76□□□□□ -1.49
NCBP3-207ENST00000577169 KRTAP2-1Q9BYU5 128 aa5.76□□□□□ -1.49
NCBP3-207ENST00000577169 KRTAP19-3Q7Z4W3 81 aa5.73□□□□□ -1.49
NCBP3-207ENST00000577169 K7ERS5 55 aa5.72□□□□□ -1.49
NCBP3-207ENST00000577169 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
NCBP3-207ENST00000577169 KRTAP4-11Q9BYQ6 195 aa5.72□□□□□ -1.49
NCBP3-207ENST00000577169 A6NED7 52 aa5.68□□□□□ -1.5
NCBP3-207ENST00000577169 KRTAP19-4Q3LI73 84 aa5.65□□□□□ -1.5
NCBP3-207ENST00000577169 MT1GP13640 62 aa5.63□□□□□ -1.51
NCBP3-207ENST00000577169 KRTAP25-1Q3LHN0 102 aa5.6□□□□□ -1.51
NCBP3-207ENST00000577169 MT1LQ93083 61 aa5.6□□□□□ -1.51
NCBP3-207ENST00000577169 PP632Q6XCG6 107 aa5.55□□□□□ -1.52
NCBP3-207ENST00000577169 KRTAP12-3P60328 96 aa5.53□□□□□ -1.52
NCBP3-207ENST00000577169 MT1MQ8N339 61 aa5.53□□□□□ -1.52
NCBP3-207ENST00000577169 CDC42SE1Q9NRR8 79 aa5.44□□□□□ -1.54
NCBP3-207ENST00000577169 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
NCBP3-207ENST00000577169 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.54
NCBP3-207ENST00000577169 DSTQ03001 7570 aaKnown RBP5.39□□□□□ -1.55
NCBP3-207ENST00000577169 ROMO1P60602 79 aa5.38□□□□□ -1.55
NCBP3-207ENST00000577169 KRTAP5-3Q6L8H2 238 aa5.28□□□□□ -1.56
NCBP3-207ENST00000577169 H3BS24 57 aa5.25□□□□□ -1.57
NCBP3-207ENST00000577169 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
NCBP3-207ENST00000577169 KRTAP5-4Q6L8H1 288 aa5.15□□□□□ -1.59
NCBP3-207ENST00000577169 MT4P47944 62 aa5.14□□□□□ -1.59
NCBP3-207ENST00000577169 LCE3CQ5T5A8 94 aa5.12□□□□□ -1.59
NCBP3-207ENST00000577169 BRK1Q8WUW1 75 aa5.07□□□□□ -1.6
NCBP3-207ENST00000577169 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
NCBP3-207ENST00000577169 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
NCBP3-207ENST00000577169 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
NCBP3-207ENST00000577169 KRTAP20-2Q3LI61 65 aa4.85□□□□□ -1.63
NCBP3-207ENST00000577169 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
NCBP3-207ENST00000577169 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
NCBP3-207ENST00000577169 PMAIP1Q13794 54 aa4.79□□□□□ -1.64
NCBP3-207ENST00000577169 MT1AP04731 61 aa4.77□□□□□ -1.65
NCBP3-207ENST00000577169 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
NCBP3-207ENST00000577169 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
NCBP3-207ENST00000577169 KRTAP5-10Q6L8G5 202 aa4.68□□□□□ -1.66
NCBP3-207ENST00000577169 GPR98Q8WXG9 6306 aa4.66□□□□□ -1.66
NCBP3-207ENST00000577169 AHNAK2Q8IVF2 5795 aa4.64□□□□□ -1.67
NCBP3-207ENST00000577169 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
NCBP3-207ENST00000577169 PRO0628Q9UI54 55 aa4.55□□□□□ -1.68
NCBP3-207ENST00000577169 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
NCBP3-207ENST00000577169 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
NCBP3-207ENST00000577169 KRTAP5-7Q6L8G8 165 aa4.48□□□□□ -1.69
NCBP3-207ENST00000577169 MT3P25713 68 aa4.36□□□□□ -1.71
NCBP3-207ENST00000577169 KTN1-AS1Q86SY8 53 aa4.31□□□□□ -1.72
NCBP3-207ENST00000577169 SVIPQ8NHG7 77 aa4.26□□□□□ -1.73
NCBP3-207ENST00000577169 KRTAP5-8O75690 187 aa4.24□□□□□ -1.73
NCBP3-207ENST00000577169 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
NCBP3-207ENST00000577169 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
NCBP3-207ENST00000577169 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
NCBP3-207ENST00000577169 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
NCBP3-207ENST00000577169 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
NCBP3-207ENST00000577169 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
NCBP3-207ENST00000577169 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
NCBP3-207ENST00000577169 MUC5BQ9HC84 5762 aaPredicted RBP3.75□□□□□ -1.81
NCBP3-207ENST00000577169 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
NCBP3-207ENST00000577169 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
NCBP3-207ENST00000577169 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
NCBP3-207ENST00000577169 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
NCBP3-207ENST00000577169 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
NCBP3-207ENST00000577169 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
NCBP3-207ENST00000577169 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
NCBP3-207ENST00000577169 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
NCBP3-207ENST00000577169 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
NCBP3-207ENST00000577169 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
NCBP3-207ENST00000577169 A0A0A0MQY5 61 aa2.76□□□□□ -1.97
NCBP3-207ENST00000577169 PRM1P04553 51 aa2.76□□□□□ -1.97
NCBP3-207ENST00000577169 INE1O15225 51 aa2.6□□□□□ -1.99
NCBP3-207ENST00000577169 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
NCBP3-207ENST00000577169 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
NCBP3-207ENST00000577169 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 89.6 ms