RNA–Protein interactions for RNA: ENST00000576894.5

SRRM2-229, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 2,210 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-229ENST00000576894 KRTAP2-4Q9BYR9 128 aa7.01□□□□□ -1.29
SRRM2-229ENST00000576894 KRTAP2-1Q9BYU5 128 aa7.01□□□□□ -1.29
SRRM2-229ENST00000576894 LCE2DQ5TA82 110 aaPredicted RBP7□□□□□ -1.29
SRRM2-229ENST00000576894 MUC12Q9UKN1 5478 aa6.97□□□□□ -1.29
SRRM2-229ENST00000576894 KRTAP9-2Q9BYQ4 174 aa6.88□□□□□ -1.31
SRRM2-229ENST00000576894 KRTAP4-3Q9BYR4 195 aa6.85□□□□□ -1.31
SRRM2-229ENST00000576894 KRTAP19-3Q7Z4W3 81 aa6.78□□□□□ -1.32
SRRM2-229ENST00000576894 LOC100996750A0A140TA64 210 aa6.77□□□□□ -1.33
SRRM2-229ENST00000576894 MT1GP13640 62 aa6.77□□□□□ -1.33
SRRM2-229ENST00000576894 MT1MQ8N339 61 aa6.76□□□□□ -1.33
SRRM2-229ENST00000576894 MACF1Q9UPN3 7388 aaKnown RBP6.74□□□□□ -1.33
SRRM2-229ENST00000576894 DSTQ03001 7570 aaKnown RBP6.67□□□□□ -1.34
SRRM2-229ENST00000576894 SPRR2FQ96RM1 72 aa6.6□□□□□ -1.35
SRRM2-229ENST00000576894 SYNE2Q8WXH0 6885 aaKnown RBP6.6□□□□□ -1.35
SRRM2-229ENST00000576894 CRCT1Q9UGL9 99 aa6.58□□□□□ -1.36
SRRM2-229ENST00000576894 LCE5AQ5TCM9 118 aa6.58□□□□□ -1.36
SRRM2-229ENST00000576894 MDN1Q9NU22 5596 aa6.45□□□□□ -1.38
SRRM2-229ENST00000576894 KRTAP9-6A0A140TA67 174 aa6.25□□□□□ -1.41
SRRM2-229ENST00000576894 KRTAP5-9P26371 169 aa6.19□□□□□ -1.42
SRRM2-229ENST00000576894 LCE1AQ5T7P2 110 aa6.18□□□□□ -1.42
SRRM2-229ENST00000576894 KRTAP12-4P60329 112 aa6.13□□□□□ -1.43
SRRM2-229ENST00000576894 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.12□□□□□ -1.43
SRRM2-229ENST00000576894 LCE3BQ5TA77 95 aa6.12□□□□□ -1.43
SRRM2-229ENST00000576894 KRTAP6-1Q3LI64 71 aa6.1□□□□□ -1.43
SRRM2-229ENST00000576894 MT1AP04731 61 aa6.09□□□□□ -1.44
SRRM2-229ENST00000576894 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
SRRM2-229ENST00000576894 SPRR2EP22531 72 aa6.04□□□□□ -1.44
SRRM2-229ENST00000576894 SPRR2BP35325 72 aa6.04□□□□□ -1.44
SRRM2-229ENST00000576894 SPRR2AP35326 72 aa6.04□□□□□ -1.44
SRRM2-229ENST00000576894 KRTAP5-5Q701N2 237 aaPredicted RBP6.03□□□□□ -1.44
SRRM2-229ENST00000576894 KRTAP4-9Q9BYQ8 210 aa6.01□□□□□ -1.45
SRRM2-229ENST00000576894 KRTAP6-3Q3LI67 103 aa5.87□□□□□ -1.47
SRRM2-229ENST00000576894 LCE3DQ9BYE3 92 aa5.79□□□□□ -1.48
SRRM2-229ENST00000576894 SPRR2DP22532 72 aa5.78□□□□□ -1.48
SRRM2-229ENST00000576894 KRTAP9-7A8MTY7 169 aa5.75□□□□□ -1.49
SRRM2-229ENST00000576894 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
SRRM2-229ENST00000576894 NEBP20929 6669 aa5.72□□□□□ -1.49
SRRM2-229ENST00000576894 LCE3EQ5T5B0 92 aa5.71□□□□□ -1.49
SRRM2-229ENST00000576894 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
SRRM2-229ENST00000576894 KRTAP6-2Q3LI66 62 aa5.48□□□□□ -1.53
SRRM2-229ENST00000576894 PRM1P04553 51 aa5.46□□□□□ -1.54
SRRM2-229ENST00000576894 MT3P25713 68 aa5.46□□□□□ -1.54
SRRM2-229ENST00000576894 KRTAP5-4Q6L8H1 288 aa5.37□□□□□ -1.55
SRRM2-229ENST00000576894 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
SRRM2-229ENST00000576894 MT4P47944 62 aa5.13□□□□□ -1.59
SRRM2-229ENST00000576894 LCE4AQ5TA78 99 aa5.05□□□□□ -1.6
SRRM2-229ENST00000576894 KRTAP20-1Q3LI63 56 aa5.03□□□□□ -1.6
SRRM2-229ENST00000576894 HMCN1Q96RW7 5635 aa5.02□□□□□ -1.61
SRRM2-229ENST00000576894 KRTAP5-2Q701N4 177 aa5.01□□□□□ -1.61
SRRM2-229ENST00000576894 KRTAP2-2Q9BYT5 123 aa5.01□□□□□ -1.61
SRRM2-229ENST00000576894 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
SRRM2-229ENST00000576894 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
SRRM2-229ENST00000576894 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
SRRM2-229ENST00000576894 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
SRRM2-229ENST00000576894 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
SRRM2-229ENST00000576894 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
SRRM2-229ENST00000576894 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.71
SRRM2-229ENST00000576894 KRTAP5-10Q6L8G5 202 aa4.31□□□□□ -1.72
SRRM2-229ENST00000576894 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
SRRM2-229ENST00000576894 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
SRRM2-229ENST00000576894 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
SRRM2-229ENST00000576894 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
SRRM2-229ENST00000576894 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
SRRM2-229ENST00000576894 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
SRRM2-229ENST00000576894 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
SRRM2-229ENST00000576894 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
SRRM2-229ENST00000576894 KRTAP21-2Q3LI59 83 aa3.97□□□□□ -1.77
SRRM2-229ENST00000576894 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.79
SRRM2-229ENST00000576894 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
SRRM2-229ENST00000576894 MUC5BQ9HC84 5762 aaPredicted RBP3.75□□□□□ -1.81
SRRM2-229ENST00000576894 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
SRRM2-229ENST00000576894 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
SRRM2-229ENST00000576894 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
SRRM2-229ENST00000576894 KRTAP21-1Q3LI58 79 aa3.46□□□□□ -1.86
SRRM2-229ENST00000576894 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.86
SRRM2-229ENST00000576894 AHNAKQ09666 5890 aaKnown RBP3.2□□□□□ -1.9
SRRM2-229ENST00000576894 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
SRRM2-229ENST00000576894 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 5.3 ms