RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 PLAC4Q8WY50 150 aa3.92□□□□□ -1.78
NPLOC4-219ENST00000576713 A6NED7 52 aa3.9□□□□□ -1.79
NPLOC4-219ENST00000576713 MUC12Q9UKN1 5478 aa3.89□□□□□ -1.79
NPLOC4-219ENST00000576713 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
NPLOC4-219ENST00000576713 NEBP20929 6669 aa3.85□□□□□ -1.79
NPLOC4-219ENST00000576713 SPATA8Q6RVD6 105 aa3.85□□□□□ -1.79
NPLOC4-219ENST00000576713 PRO2289Q9P1D8 64 aa3.85□□□□□ -1.79
NPLOC4-219ENST00000576713 KRTAP12-2P59991 146 aa3.84□□□□□ -1.79
NPLOC4-219ENST00000576713 MDN1Q9NU22 5596 aa3.84□□□□□ -1.8
NPLOC4-219ENST00000576713 A0A0D9SG42 100 aa3.81□□□□□ -1.8
NPLOC4-219ENST00000576713 A0A1B0GU33 70 aa3.81□□□□□ -1.8
NPLOC4-219ENST00000576713 A0A1B0GU69 56 aa3.79□□□□□ -1.8
NPLOC4-219ENST00000576713 KRTAP12-1P59990 96 aa3.76□□□□□ -1.81
NPLOC4-219ENST00000576713 UQCR11O14957 56 aa3.73□□□□□ -1.81
NPLOC4-219ENST00000576713 KRTAP8-1Q8IUC2 63 aa3.72□□□□□ -1.81
NPLOC4-219ENST00000576713 KRTAP20-1Q3LI63 56 aa3.71□□□□□ -1.82
NPLOC4-219ENST00000576713 SPINT4Q6UDR6 99 aa3.71□□□□□ -1.82
NPLOC4-219ENST00000576713 CAMK2N1Q7Z7J9 78 aa3.71□□□□□ -1.82
NPLOC4-219ENST00000576713 SPRR2FQ96RM1 72 aa3.71□□□□□ -1.82
NPLOC4-219ENST00000576713 MIR22HGQ0VDD5 57 aa3.7□□□□□ -1.82
NPLOC4-219ENST00000576713 SPRR2EP22531 72 aa3.66□□□□□ -1.82
NPLOC4-219ENST00000576713 SPRR2BP35325 72 aa3.66□□□□□ -1.82
NPLOC4-219ENST00000576713 SPRR2AP35326 72 aa3.66□□□□□ -1.82
NPLOC4-219ENST00000576713 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
NPLOC4-219ENST00000576713 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
NPLOC4-219ENST00000576713 C10orf95Q9H7T3 257 aa3.6□□□□□ -1.83
NPLOC4-219ENST00000576713 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
NPLOC4-219ENST00000576713 KRTAP19-7Q3SYF9 63 aa3.57□□□□□ -1.84
NPLOC4-219ENST00000576713 SPRR2DP22532 72 aa3.53□□□□□ -1.84
NPLOC4-219ENST00000576713 MT1EP04732 61 aa3.52□□□□□ -1.85
NPLOC4-219ENST00000576713 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
NPLOC4-219ENST00000576713 KRTAP19-5Q3LI72 72 aa3.5□□□□□ -1.85
NPLOC4-219ENST00000576713 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
NPLOC4-219ENST00000576713 K7ERS5 55 aa3.49□□□□□ -1.85
NPLOC4-219ENST00000576713 KRTAP25-1Q3LHN0 102 aa3.49□□□□□ -1.85
NPLOC4-219ENST00000576713 TNP1P09430 55 aa3.46□□□□□ -1.86
NPLOC4-219ENST00000576713 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
NPLOC4-219ENST00000576713 KRTAP19-3Q7Z4W3 81 aa3.42□□□□□ -1.86
NPLOC4-219ENST00000576713 ROMO1P60602 79 aa3.4□□□□□ -1.87
NPLOC4-219ENST00000576713 MT1LQ93083 61 aa3.38□□□□□ -1.87
NPLOC4-219ENST00000576713 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
NPLOC4-219ENST00000576713 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
NPLOC4-219ENST00000576713 MT1GP13640 62 aa3.33□□□□□ -1.88
NPLOC4-219ENST00000576713 MT1MQ8N339 61 aa3.33□□□□□ -1.88
NPLOC4-219ENST00000576713 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
NPLOC4-219ENST00000576713 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
NPLOC4-219ENST00000576713 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
NPLOC4-219ENST00000576713 PP632Q6XCG6 107 aa3.25□□□□□ -1.89
NPLOC4-219ENST00000576713 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
NPLOC4-219ENST00000576713 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
NPLOC4-219ENST00000576713 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
NPLOC4-219ENST00000576713 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
NPLOC4-219ENST00000576713 MT4P47944 62 aa3.08□□□□□ -1.92
NPLOC4-219ENST00000576713 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.92
NPLOC4-219ENST00000576713 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.93
NPLOC4-219ENST00000576713 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
NPLOC4-219ENST00000576713 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
NPLOC4-219ENST00000576713 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
NPLOC4-219ENST00000576713 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
NPLOC4-219ENST00000576713 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
NPLOC4-219ENST00000576713 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
NPLOC4-219ENST00000576713 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
NPLOC4-219ENST00000576713 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
NPLOC4-219ENST00000576713 MT1AP04731 61 aa2.85□□□□□ -1.95
NPLOC4-219ENST00000576713 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
NPLOC4-219ENST00000576713 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
NPLOC4-219ENST00000576713 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
NPLOC4-219ENST00000576713 INE1O15225 51 aa2.64□□□□□ -1.99
NPLOC4-219ENST00000576713 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
NPLOC4-219ENST00000576713 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
NPLOC4-219ENST00000576713 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
NPLOC4-219ENST00000576713 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
NPLOC4-219ENST00000576713 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
NPLOC4-219ENST00000576713 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
NPLOC4-219ENST00000576713 PRM1P04553 51 aa1.77□□□□□ -2.13
NPLOC4-219ENST00000576713 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
NPLOC4-219ENST00000576713 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
NPLOC4-219ENST00000576713 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 10.3 ms