RNA–Protein interactions for RNA: ENST00000575515.1

NDC80-204, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 5

Gene NDC80, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-204ENST00000575515 KRTAP19-8Q3LI54 63 aa4.4□□□□□ -1.71
NDC80-204ENST00000575515 KRTAP12-1P59990 96 aa4.39□□□□□ -1.71
NDC80-204ENST00000575515 KRTAP12-2P59991 146 aa4.38□□□□□ -1.71
NDC80-204ENST00000575515 KTN1-AS1Q86SY8 53 aa4.36□□□□□ -1.71
NDC80-204ENST00000575515 SPRR2GQ9BYE4 73 aa4.35□□□□□ -1.71
NDC80-204ENST00000575515 SPRR2DP22532 72 aa4.33□□□□□ -1.72
NDC80-204ENST00000575515 LCE1AQ5T7P2 110 aa4.31□□□□□ -1.72
NDC80-204ENST00000575515 ROMO1P60602 79 aa4.3□□□□□ -1.72
NDC80-204ENST00000575515 CAMK2N1Q7Z7J9 78 aa4.27□□□□□ -1.73
NDC80-204ENST00000575515 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
NDC80-204ENST00000575515 GPR98Q8WXG9 6306 aa4.27□□□□□ -1.73
NDC80-204ENST00000575515 PLAC4Q8WY50 150 aa4.26□□□□□ -1.73
NDC80-204ENST00000575515 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
NDC80-204ENST00000575515 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
NDC80-204ENST00000575515 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
NDC80-204ENST00000575515 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
NDC80-204ENST00000575515 KRTAP25-1Q3LHN0 102 aa4.12□□□□□ -1.75
NDC80-204ENST00000575515 MT1XP80297 61 aa4.1□□□□□ -1.75
NDC80-204ENST00000575515 TNP1P09430 55 aa4.06□□□□□ -1.76
NDC80-204ENST00000575515 PP632Q6XCG6 107 aa3.97□□□□□ -1.77
NDC80-204ENST00000575515 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
NDC80-204ENST00000575515 KRTAP23-1A1A580 65 aa3.92□□□□□ -1.78
NDC80-204ENST00000575515 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
NDC80-204ENST00000575515 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
NDC80-204ENST00000575515 KRTAP10-12P60413 245 aa3.88□□□□□ -1.79
NDC80-204ENST00000575515 LCE3AQ5TA76 89 aa3.84□□□□□ -1.79
NDC80-204ENST00000575515 MT4P47944 62 aa3.83□□□□□ -1.8
NDC80-204ENST00000575515 KRTAP5-10Q6L8G5 202 aa3.82□□□□□ -1.8
NDC80-204ENST00000575515 AHNAK2Q8IVF2 5795 aa3.76□□□□□ -1.81
NDC80-204ENST00000575515 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
NDC80-204ENST00000575515 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
NDC80-204ENST00000575515 KRTAP19-3Q7Z4W3 81 aa3.73□□□□□ -1.81
NDC80-204ENST00000575515 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
NDC80-204ENST00000575515 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
NDC80-204ENST00000575515 MT1EP04732 61 aa3.66□□□□□ -1.82
NDC80-204ENST00000575515 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
NDC80-204ENST00000575515 KRTAP19-5Q3LI72 72 aa3.64□□□□□ -1.83
NDC80-204ENST00000575515 MT1GP13640 62 aa3.58□□□□□ -1.84
NDC80-204ENST00000575515 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
NDC80-204ENST00000575515 MT1MQ8N339 61 aa3.53□□□□□ -1.84
NDC80-204ENST00000575515 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
NDC80-204ENST00000575515 A0A0A0MQY5 61 aa3.48□□□□□ -1.85
NDC80-204ENST00000575515 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
NDC80-204ENST00000575515 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
NDC80-204ENST00000575515 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
NDC80-204ENST00000575515 MT1LQ93083 61 aa3.44□□□□□ -1.86
NDC80-204ENST00000575515 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
NDC80-204ENST00000575515 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
NDC80-204ENST00000575515 AHNAKQ09666 5890 aaKnown RBP3.25□□□□□ -1.89
NDC80-204ENST00000575515 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
NDC80-204ENST00000575515 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
NDC80-204ENST00000575515 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
NDC80-204ENST00000575515 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
NDC80-204ENST00000575515 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
NDC80-204ENST00000575515 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
NDC80-204ENST00000575515 MUC5BQ9HC84 5762 aaPredicted RBP3.15□□□□□ -1.9
NDC80-204ENST00000575515 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
NDC80-204ENST00000575515 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
NDC80-204ENST00000575515 MT3P25713 68 aa3.06□□□□□ -1.92
NDC80-204ENST00000575515 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
NDC80-204ENST00000575515 MT1AP04731 61 aa2.94□□□□□ -1.94
NDC80-204ENST00000575515 KRTAP6-1Q3LI64 71 aa2.93□□□□□ -1.94
NDC80-204ENST00000575515 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
NDC80-204ENST00000575515 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
NDC80-204ENST00000575515 INE1O15225 51 aa2.83□□□□□ -1.96
NDC80-204ENST00000575515 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
NDC80-204ENST00000575515 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
NDC80-204ENST00000575515 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
NDC80-204ENST00000575515 LCE1FQ5T754 118 aa2.57□□□□□ -2
NDC80-204ENST00000575515 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
NDC80-204ENST00000575515 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
NDC80-204ENST00000575515 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
NDC80-204ENST00000575515 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
NDC80-204ENST00000575515 PRM1P04553 51 aa2.25□□□□□ -2.05
NDC80-204ENST00000575515 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
NDC80-204ENST00000575515 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
NDC80-204ENST00000575515 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
NDC80-204ENST00000575515 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 63.3 ms