RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 TNP1P09430 55 aa6.43□□□□□ -1.38
TMEM88-202ENST00000574668 GPR98Q8WXG9 6306 aa6.42□□□□□ -1.38
TMEM88-202ENST00000574668 DSTQ03001 7570 aaKnown RBP6.34□□□□□ -1.39
TMEM88-202ENST00000574668 KRTAP25-1Q3LHN0 102 aa6.25□□□□□ -1.41
TMEM88-202ENST00000574668 LCE3AQ5TA76 89 aa6.22□□□□□ -1.41
TMEM88-202ENST00000574668 KRTAP4-9Q9BYQ8 210 aa6.19□□□□□ -1.42
TMEM88-202ENST00000574668 KRTAP19-7Q3SYF9 63 aa6.18□□□□□ -1.42
TMEM88-202ENST00000574668 KRTAP19-5Q3LI72 72 aa6.17□□□□□ -1.42
TMEM88-202ENST00000574668 ROMO1P60602 79 aa6.16□□□□□ -1.42
TMEM88-202ENST00000574668 MT1EP04732 61 aa6.13□□□□□ -1.43
TMEM88-202ENST00000574668 PRAC1Q96KF2 57 aa6.1□□□□□ -1.43
TMEM88-202ENST00000574668 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
TMEM88-202ENST00000574668 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
TMEM88-202ENST00000574668 KRTAP19-3Q7Z4W3 81 aa6.01□□□□□ -1.45
TMEM88-202ENST00000574668 KRTAP12-3P60328 96 aa6□□□□□ -1.45
TMEM88-202ENST00000574668 LCE1DQ5T752 114 aa5.97□□□□□ -1.45
TMEM88-202ENST00000574668 MT1LQ93083 61 aa5.93□□□□□ -1.46
TMEM88-202ENST00000574668 MT1GP13640 62 aa5.92□□□□□ -1.46
TMEM88-202ENST00000574668 PP632Q6XCG6 107 aa5.91□□□□□ -1.46
TMEM88-202ENST00000574668 HMCN1Q96RW7 5635 aa5.9□□□□□ -1.47
TMEM88-202ENST00000574668 MT4P47944 62 aa5.88□□□□□ -1.47
TMEM88-202ENST00000574668 AHNAK2Q8IVF2 5795 aa5.83□□□□□ -1.48
TMEM88-202ENST00000574668 LCE4AQ5TA78 99 aa5.81□□□□□ -1.48
TMEM88-202ENST00000574668 MT1MQ8N339 61 aa5.81□□□□□ -1.48
TMEM88-202ENST00000574668 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
TMEM88-202ENST00000574668 H3BS24 57 aa5.71□□□□□ -1.5
TMEM88-202ENST00000574668 KRTAP5-10Q6L8G5 202 aa5.71□□□□□ -1.5
TMEM88-202ENST00000574668 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
TMEM88-202ENST00000574668 KRTAP4-3Q9BYR4 195 aa5.68□□□□□ -1.5
TMEM88-202ENST00000574668 KRTAP4-6Q9BYQ5 205 aa5.67□□□□□ -1.5
TMEM88-202ENST00000574668 KRTAP5-4Q6L8H1 288 aa5.66□□□□□ -1.5
TMEM88-202ENST00000574668 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.5
TMEM88-202ENST00000574668 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
TMEM88-202ENST00000574668 KRTAP5-7Q6L8G8 165 aa5.52□□□□□ -1.53
TMEM88-202ENST00000574668 KRTAP5-3Q6L8H2 238 aa5.5□□□□□ -1.53
TMEM88-202ENST00000574668 KRTAP20-2Q3LI61 65 aa5.39□□□□□ -1.55
TMEM88-202ENST00000574668 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
TMEM88-202ENST00000574668 SPRR5A0A1B0GTR4 108 aa5.3□□□□□ -1.56
TMEM88-202ENST00000574668 KRTAP5-5Q701N2 237 aaPredicted RBP5.29□□□□□ -1.56
TMEM88-202ENST00000574668 NDUFAF8A1L188 74 aa5.26□□□□□ -1.57
TMEM88-202ENST00000574668 SYNE1Q8NF91 8797 aaKnown RBP5.25□□□□□ -1.57
TMEM88-202ENST00000574668 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
TMEM88-202ENST00000574668 KRTAP9-6A8MVA2 160 aa5.18□□□□□ -1.58
TMEM88-202ENST00000574668 LUZP6Q538Z0 58 aa5.11□□□□□ -1.59
TMEM88-202ENST00000574668 MT1AP04731 61 aa5.07□□□□□ -1.6
TMEM88-202ENST00000574668 A0A0A0MQY5 61 aa5□□□□□ -1.61
TMEM88-202ENST00000574668 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
TMEM88-202ENST00000574668 KRTAP6-1Q3LI64 71 aa4.99□□□□□ -1.61
TMEM88-202ENST00000574668 KRTAP5-2Q701N4 177 aa4.9□□□□□ -1.63
TMEM88-202ENST00000574668 AHNAKQ09666 5890 aaKnown RBP4.89□□□□□ -1.63
TMEM88-202ENST00000574668 MUC5ACP98088 5654 aa4.86□□□□□ -1.63
TMEM88-202ENST00000574668 KRTAP5-8O75690 187 aa4.85□□□□□ -1.63
TMEM88-202ENST00000574668 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
TMEM88-202ENST00000574668 MUC5BQ9HC84 5762 aaPredicted RBP4.83□□□□□ -1.64
TMEM88-202ENST00000574668 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
TMEM88-202ENST00000574668 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
TMEM88-202ENST00000574668 MT3P25713 68 aa4.64□□□□□ -1.67
TMEM88-202ENST00000574668 INE1O15225 51 aa4.63□□□□□ -1.67
TMEM88-202ENST00000574668 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
TMEM88-202ENST00000574668 KRTAP5-1Q6L8H4 278 aa4.47□□□□□ -1.69
TMEM88-202ENST00000574668 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
TMEM88-202ENST00000574668 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
TMEM88-202ENST00000574668 KRTAP4-12Q9BQ66 201 aa4.08□□□□□ -1.76
TMEM88-202ENST00000574668 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
TMEM88-202ENST00000574668 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
TMEM88-202ENST00000574668 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
TMEM88-202ENST00000574668 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
TMEM88-202ENST00000574668 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
TMEM88-202ENST00000574668 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
TMEM88-202ENST00000574668 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
TMEM88-202ENST00000574668 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
TMEM88-202ENST00000574668 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
TMEM88-202ENST00000574668 PRM1P04553 51 aa3.17□□□□□ -1.9
TMEM88-202ENST00000574668 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
TMEM88-202ENST00000574668 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
TMEM88-202ENST00000574668 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
TMEM88-202ENST00000574668 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms