RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 KRTAP2-1Q9BYU5 128 aa5.08□□□□□ -1.6
ABR-228ENST00000574437 MACF1Q9UPN3 7388 aaKnown RBP5.08□□□□□ -1.6
ABR-228ENST00000574437 MT1LQ93083 61 aa5.07□□□□□ -1.6
ABR-228ENST00000574437 MT1EP04732 61 aa5.04□□□□□ -1.6
ABR-228ENST00000574437 SYNE2Q8WXH0 6885 aaKnown RBP5.01□□□□□ -1.61
ABR-228ENST00000574437 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
ABR-228ENST00000574437 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
ABR-228ENST00000574437 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
ABR-228ENST00000574437 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
ABR-228ENST00000574437 CRCT1Q9UGL9 99 aa4.89□□□□□ -1.63
ABR-228ENST00000574437 MT1GP13640 62 aa4.86□□□□□ -1.63
ABR-228ENST00000574437 MDN1Q9NU22 5596 aa4.82□□□□□ -1.64
ABR-228ENST00000574437 SPRR2FQ96RM1 72 aa4.81□□□□□ -1.64
ABR-228ENST00000574437 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
ABR-228ENST00000574437 MT1MQ8N339 61 aa4.71□□□□□ -1.65
ABR-228ENST00000574437 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
ABR-228ENST00000574437 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
ABR-228ENST00000574437 KRTAP9-6A0A140TA67 174 aa4.58□□□□□ -1.68
ABR-228ENST00000574437 LCE5AQ5TCM9 118 aa4.57□□□□□ -1.68
ABR-228ENST00000574437 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
ABR-228ENST00000574437 SYNE1Q8NF91 8797 aaKnown RBP4.53□□□□□ -1.68
ABR-228ENST00000574437 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
ABR-228ENST00000574437 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
ABR-228ENST00000574437 KRTAP5-9P26371 169 aa4.5□□□□□ -1.69
ABR-228ENST00000574437 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
ABR-228ENST00000574437 SPRR2EP22531 72 aa4.47□□□□□ -1.69
ABR-228ENST00000574437 SPRR2BP35325 72 aa4.47□□□□□ -1.69
ABR-228ENST00000574437 SPRR2AP35326 72 aa4.47□□□□□ -1.69
ABR-228ENST00000574437 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
ABR-228ENST00000574437 KRTAP6-3Q3LI67 103 aa4.34□□□□□ -1.72
ABR-228ENST00000574437 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
ABR-228ENST00000574437 SPRR2DP22532 72 aa4.27□□□□□ -1.73
ABR-228ENST00000574437 MT1AP04731 61 aa4.25□□□□□ -1.73
ABR-228ENST00000574437 KRTAP9-7A8MTY7 169 aa4.23□□□□□ -1.73
ABR-228ENST00000574437 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
ABR-228ENST00000574437 NEBP20929 6669 aa4.16□□□□□ -1.74
ABR-228ENST00000574437 PRM1P04553 51 aa4.15□□□□□ -1.74
ABR-228ENST00000574437 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
ABR-228ENST00000574437 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.77
ABR-228ENST00000574437 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.77
ABR-228ENST00000574437 MT4P47944 62 aa3.85□□□□□ -1.79
ABR-228ENST00000574437 KRTAP4-6Q9BYQ5 205 aa3.83□□□□□ -1.8
ABR-228ENST00000574437 MT3P25713 68 aa3.82□□□□□ -1.8
ABR-228ENST00000574437 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
ABR-228ENST00000574437 HMCN1Q96RW7 5635 aa3.73□□□□□ -1.81
ABR-228ENST00000574437 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
ABR-228ENST00000574437 KRTAP20-1Q3LI63 56 aa3.69□□□□□ -1.82
ABR-228ENST00000574437 LCE1DQ5T752 114 aa3.66□□□□□ -1.82
ABR-228ENST00000574437 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
ABR-228ENST00000574437 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
ABR-228ENST00000574437 KRTAP5-3Q6L8H2 238 aa3.44□□□□□ -1.86
ABR-228ENST00000574437 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
ABR-228ENST00000574437 MUC5ACP98088 5654 aa3.21□□□□□ -1.89
ABR-228ENST00000574437 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
ABR-228ENST00000574437 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
ABR-228ENST00000574437 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
ABR-228ENST00000574437 KRTAP4-11Q9BYQ6 195 aa3.16□□□□□ -1.9
ABR-228ENST00000574437 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
ABR-228ENST00000574437 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
ABR-228ENST00000574437 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
ABR-228ENST00000574437 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
ABR-228ENST00000574437 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
ABR-228ENST00000574437 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
ABR-228ENST00000574437 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
ABR-228ENST00000574437 KRTAP4-2Q9BYR5 136 aa2.97□□□□□ -1.93
ABR-228ENST00000574437 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
ABR-228ENST00000574437 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
ABR-228ENST00000574437 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
ABR-228ENST00000574437 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
ABR-228ENST00000574437 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
ABR-228ENST00000574437 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
ABR-228ENST00000574437 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
ABR-228ENST00000574437 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
ABR-228ENST00000574437 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
ABR-228ENST00000574437 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
ABR-228ENST00000574437 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
ABR-228ENST00000574437 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 60.1 ms