RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 KRTAP20-1Q3LI63 56 aa2.63□□□□□ -1.99
PRPF8-210ENST00000574217 KRTAP5-9P26371 169 aa2.62□□□□□ -1.99
PRPF8-210ENST00000574217 ROMO1P60602 79 aa2.62□□□□□ -1.99
PRPF8-210ENST00000574217 KRTAP25-1Q3LHN0 102 aa2.61□□□□□ -1.99
PRPF8-210ENST00000574217 KRTAP8-1Q8IUC2 63 aa2.61□□□□□ -1.99
PRPF8-210ENST00000574217 NEBP20929 6669 aa2.61□□□□□ -1.99
PRPF8-210ENST00000574217 MUC12Q9UKN1 5478 aa2.6□□□□□ -1.99
PRPF8-210ENST00000574217 SPRR2FQ96RM1 72 aa2.58□□□□□ -2
PRPF8-210ENST00000574217 PRO0628Q9UI54 55 aa2.58□□□□□ -2
PRPF8-210ENST00000574217 PMAIP1Q13794 54 aa2.57□□□□□ -2
PRPF8-210ENST00000574217 LCE1AQ5T7P2 110 aa2.56□□□□□ -2
PRPF8-210ENST00000574217 LCE3AQ5TA76 89 aa2.55□□□□□ -2
PRPF8-210ENST00000574217 MDN1Q9NU22 5596 aa2.55□□□□□ -2
PRPF8-210ENST00000574217 KRTAP5-3Q6L8H2 238 aa2.54□□□□□ -2
PRPF8-210ENST00000574217 SPRR2EP22531 72 aa2.52□□□□□ -2.01
PRPF8-210ENST00000574217 SPRR2BP35325 72 aa2.52□□□□□ -2.01
PRPF8-210ENST00000574217 SPRR2AP35326 72 aa2.52□□□□□ -2.01
PRPF8-210ENST00000574217 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
PRPF8-210ENST00000574217 KRTAP19-5Q3LI72 72 aa2.49□□□□□ -2.01
PRPF8-210ENST00000574217 KRTAP19-7Q3SYF9 63 aa2.49□□□□□ -2.01
PRPF8-210ENST00000574217 MT1EP04732 61 aa2.46□□□□□ -2.02
PRPF8-210ENST00000574217 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
PRPF8-210ENST00000574217 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
PRPF8-210ENST00000574217 KRTAP2-3P0C7H8 128 aa2.44□□□□□ -2.02
PRPF8-210ENST00000574217 KRTAP2-4Q9BYR9 128 aa2.44□□□□□ -2.02
PRPF8-210ENST00000574217 SPRR2DP22532 72 aa2.43□□□□□ -2.02
PRPF8-210ENST00000574217 KTN1-AS1Q86SY8 53 aa2.42□□□□□ -2.02
PRPF8-210ENST00000574217 KRTAP19-3Q7Z4W3 81 aa2.4□□□□□ -2.03
PRPF8-210ENST00000574217 PRAC1Q96KF2 57 aa2.4□□□□□ -2.03
PRPF8-210ENST00000574217 MT1LQ93083 61 aa2.39□□□□□ -2.03
PRPF8-210ENST00000574217 MT1GP13640 62 aa2.37□□□□□ -2.03
PRPF8-210ENST00000574217 KRTAP2-2Q9BYT5 123 aa2.35□□□□□ -2.03
PRPF8-210ENST00000574217 KRTAP2-1Q9BYU5 128 aa2.34□□□□□ -2.03
PRPF8-210ENST00000574217 MT1MQ8N339 61 aa2.33□□□□□ -2.04
PRPF8-210ENST00000574217 LCE3CQ5T5A8 94 aa2.28□□□□□ -2.04
PRPF8-210ENST00000574217 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
PRPF8-210ENST00000574217 DSTQ03001 7570 aaKnown RBP2.26□□□□□ -2.05
PRPF8-210ENST00000574217 MT3P25713 68 aa2.23□□□□□ -2.05
PRPF8-210ENST00000574217 KRTAP9-6A8MVA2 160 aa2.14□□□□□ -2.07
PRPF8-210ENST00000574217 LCE1FQ5T754 118 aa2.14□□□□□ -2.07
PRPF8-210ENST00000574217 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
PRPF8-210ENST00000574217 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
PRPF8-210ENST00000574217 MT4P47944 62 aa2.12□□□□□ -2.07
PRPF8-210ENST00000574217 KRTAP5-5Q701N2 237 aaPredicted RBP2.12□□□□□ -2.07
PRPF8-210ENST00000574217 NDUFAF8A1L188 74 aa2.1□□□□□ -2.07
PRPF8-210ENST00000574217 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
PRPF8-210ENST00000574217 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
PRPF8-210ENST00000574217 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.07
PRPF8-210ENST00000574217 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
PRPF8-210ENST00000574217 MT1AP04731 61 aa2.04□□□□□ -2.08
PRPF8-210ENST00000574217 LCE1EQ5T753 118 aa2.03□□□□□ -2.08
PRPF8-210ENST00000574217 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
PRPF8-210ENST00000574217 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
PRPF8-210ENST00000574217 LUZP6Q538Z0 58 aa2.02□□□□□ -2.09
PRPF8-210ENST00000574217 KRTAP20-2Q3LI61 65 aa2.01□□□□□ -2.09
PRPF8-210ENST00000574217 KRTAP6-1Q3LI64 71 aa2□□□□□ -2.09
PRPF8-210ENST00000574217 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
PRPF8-210ENST00000574217 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
PRPF8-210ENST00000574217 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.11
PRPF8-210ENST00000574217 KRTAP6-2Q3LI66 62 aa1.88□□□□□ -2.11
PRPF8-210ENST00000574217 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
PRPF8-210ENST00000574217 LCE3EQ5T5B0 92 aa1.84□□□□□ -2.11
PRPF8-210ENST00000574217 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
PRPF8-210ENST00000574217 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
PRPF8-210ENST00000574217 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
PRPF8-210ENST00000574217 OBSCNQ5VST9 7968 aa1.73□□□□□ -2.13
PRPF8-210ENST00000574217 LCE3DQ9BYE3 92 aa1.7□□□□□ -2.14
PRPF8-210ENST00000574217 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
PRPF8-210ENST00000574217 KRTAP4-4Q9BYR3 166 aa1.6□□□□□ -2.15
PRPF8-210ENST00000574217 LCE1BQ5T7P3 118 aa1.55□□□□□ -2.16
PRPF8-210ENST00000574217 LCE1CQ5T751 118 aa1.53□□□□□ -2.16
PRPF8-210ENST00000574217 INE1O15225 51 aa1.52□□□□□ -2.17
PRPF8-210ENST00000574217 PRM1P04553 51 aa1.35□□□□□ -2.19
PRPF8-210ENST00000574217 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
PRPF8-210ENST00000574217 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
PRPF8-210ENST00000574217 MUC19Q7Z5P9 8384 aa1.21□□□□□ -2.22
PRPF8-210ENST00000574217 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
PRPF8-210ENST00000574217 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 90.3 ms