RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
NPLOC4-214ENST00000573876 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
NPLOC4-214ENST00000573876 SPRR2DP22532 72 aa4.7□□□□□ -1.66
NPLOC4-214ENST00000573876 KRTAP12-3P60328 96 aa4.69□□□□□ -1.66
NPLOC4-214ENST00000573876 PP632Q6XCG6 107 aa4.67□□□□□ -1.66
NPLOC4-214ENST00000573876 KRTAP19-3Q7Z4W3 81 aa4.67□□□□□ -1.66
NPLOC4-214ENST00000573876 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
NPLOC4-214ENST00000573876 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
NPLOC4-214ENST00000573876 MT1GP13640 62 aa4.61□□□□□ -1.67
NPLOC4-214ENST00000573876 MT1LQ93083 61 aa4.6□□□□□ -1.67
NPLOC4-214ENST00000573876 LCE3BQ5TA77 95 aa4.54□□□□□ -1.68
NPLOC4-214ENST00000573876 DSTQ03001 7570 aaKnown RBP4.54□□□□□ -1.68
NPLOC4-214ENST00000573876 KRTAP2-2Q9BYT5 123 aa4.53□□□□□ -1.68
NPLOC4-214ENST00000573876 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
NPLOC4-214ENST00000573876 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
NPLOC4-214ENST00000573876 MT1MQ8N339 61 aa4.51□□□□□ -1.69
NPLOC4-214ENST00000573876 PRAC1Q96KF2 57 aa4.5□□□□□ -1.69
NPLOC4-214ENST00000573876 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
NPLOC4-214ENST00000573876 KRTAP4-7Q9BYR0 210 aa4.43□□□□□ -1.7
NPLOC4-214ENST00000573876 KTN1-AS1Q86SY8 53 aa4.42□□□□□ -1.7
NPLOC4-214ENST00000573876 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
NPLOC4-214ENST00000573876 LCE3CQ5T5A8 94 aa4.37□□□□□ -1.71
NPLOC4-214ENST00000573876 SVIPQ8NHG7 77 aa4.21□□□□□ -1.74
NPLOC4-214ENST00000573876 LCE4AQ5TA78 99 aa4.18□□□□□ -1.74
NPLOC4-214ENST00000573876 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
NPLOC4-214ENST00000573876 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
NPLOC4-214ENST00000573876 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
NPLOC4-214ENST00000573876 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
NPLOC4-214ENST00000573876 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
NPLOC4-214ENST00000573876 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
NPLOC4-214ENST00000573876 MT4P47944 62 aa4.07□□□□□ -1.76
NPLOC4-214ENST00000573876 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
NPLOC4-214ENST00000573876 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
NPLOC4-214ENST00000573876 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
NPLOC4-214ENST00000573876 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
NPLOC4-214ENST00000573876 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
NPLOC4-214ENST00000573876 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
NPLOC4-214ENST00000573876 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
NPLOC4-214ENST00000573876 MT1AP04731 61 aa3.92□□□□□ -1.78
NPLOC4-214ENST00000573876 KRTAP5-7Q6L8G8 165 aa3.91□□□□□ -1.78
NPLOC4-214ENST00000573876 H3BS24 57 aa3.87□□□□□ -1.79
NPLOC4-214ENST00000573876 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
NPLOC4-214ENST00000573876 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
NPLOC4-214ENST00000573876 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
NPLOC4-214ENST00000573876 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
NPLOC4-214ENST00000573876 LUZP6Q538Z0 58 aa3.73□□□□□ -1.81
NPLOC4-214ENST00000573876 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
NPLOC4-214ENST00000573876 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
NPLOC4-214ENST00000573876 MT3P25713 68 aa3.6□□□□□ -1.83
NPLOC4-214ENST00000573876 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
NPLOC4-214ENST00000573876 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
NPLOC4-214ENST00000573876 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
NPLOC4-214ENST00000573876 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
NPLOC4-214ENST00000573876 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
NPLOC4-214ENST00000573876 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
NPLOC4-214ENST00000573876 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
NPLOC4-214ENST00000573876 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
NPLOC4-214ENST00000573876 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
NPLOC4-214ENST00000573876 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
NPLOC4-214ENST00000573876 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
NPLOC4-214ENST00000573876 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
NPLOC4-214ENST00000573876 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
NPLOC4-214ENST00000573876 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
NPLOC4-214ENST00000573876 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
NPLOC4-214ENST00000573876 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
NPLOC4-214ENST00000573876 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
NPLOC4-214ENST00000573876 INE1O15225 51 aa2.78□□□□□ -1.96
NPLOC4-214ENST00000573876 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
NPLOC4-214ENST00000573876 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
NPLOC4-214ENST00000573876 PRM1P04553 51 aa2.55□□□□□ -2
NPLOC4-214ENST00000573876 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
NPLOC4-214ENST00000573876 LCE1FQ5T754 118 aa2.54□□□□□ -2
NPLOC4-214ENST00000573876 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
NPLOC4-214ENST00000573876 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
NPLOC4-214ENST00000573876 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
NPLOC4-214ENST00000573876 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
NPLOC4-214ENST00000573876 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms