RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
RPAIN-213ENST00000573577 KRTAP10-12P60413 245 aa5.38□□□□□ -1.55
RPAIN-213ENST00000573577 PMAIP1Q13794 54 aa5.38□□□□□ -1.55
RPAIN-213ENST00000573577 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
RPAIN-213ENST00000573577 KRTAP20-1Q3LI63 56 aa5.32□□□□□ -1.56
RPAIN-213ENST00000573577 SPRR2EP22531 72 aa5.31□□□□□ -1.56
RPAIN-213ENST00000573577 SPRR2BP35325 72 aa5.31□□□□□ -1.56
RPAIN-213ENST00000573577 SPRR2AP35326 72 aa5.31□□□□□ -1.56
RPAIN-213ENST00000573577 BRK1Q8WUW1 75 aa5.31□□□□□ -1.56
RPAIN-213ENST00000573577 A6NED7 52 aa5.3□□□□□ -1.56
RPAIN-213ENST00000573577 PRAC1Q96KF2 57 aa5.28□□□□□ -1.56
RPAIN-213ENST00000573577 K7ERS5 55 aa5.26□□□□□ -1.57
RPAIN-213ENST00000573577 CDC42SE1Q9NRR8 79 aa5.22□□□□□ -1.57
RPAIN-213ENST00000573577 TNP1P09430 55 aa5.19□□□□□ -1.58
RPAIN-213ENST00000573577 KRTAP2-3P0C7H8 128 aa5.19□□□□□ -1.58
RPAIN-213ENST00000573577 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
RPAIN-213ENST00000573577 KRTAP2-4Q9BYR9 128 aa5.19□□□□□ -1.58
RPAIN-213ENST00000573577 C10orf95Q9H7T3 257 aa5.19□□□□□ -1.58
RPAIN-213ENST00000573577 SPRR2DP22532 72 aa5.13□□□□□ -1.59
RPAIN-213ENST00000573577 KRTAP19-7Q3SYF9 63 aa5.05□□□□□ -1.6
RPAIN-213ENST00000573577 KRTAP25-1Q3LHN0 102 aa5.03□□□□□ -1.6
RPAIN-213ENST00000573577 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.6
RPAIN-213ENST00000573577 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
RPAIN-213ENST00000573577 LCE3AQ5TA76 89 aa5.02□□□□□ -1.61
RPAIN-213ENST00000573577 MT1EP04732 61 aa5.01□□□□□ -1.61
RPAIN-213ENST00000573577 KRTAP19-5Q3LI72 72 aa5□□□□□ -1.61
RPAIN-213ENST00000573577 KRTAP19-3Q7Z4W3 81 aa4.94□□□□□ -1.62
RPAIN-213ENST00000573577 ROMO1P60602 79 aa4.9□□□□□ -1.63
RPAIN-213ENST00000573577 MT1GP13640 62 aa4.85□□□□□ -1.63
RPAIN-213ENST00000573577 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
RPAIN-213ENST00000573577 PP632Q6XCG6 107 aa4.84□□□□□ -1.63
RPAIN-213ENST00000573577 MT1LQ93083 61 aa4.82□□□□□ -1.64
RPAIN-213ENST00000573577 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
RPAIN-213ENST00000573577 MT3P25713 68 aa4.79□□□□□ -1.64
RPAIN-213ENST00000573577 MT1MQ8N339 61 aa4.76□□□□□ -1.65
RPAIN-213ENST00000573577 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
RPAIN-213ENST00000573577 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
RPAIN-213ENST00000573577 GPR98Q8WXG9 6306 aa4.6□□□□□ -1.67
RPAIN-213ENST00000573577 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
RPAIN-213ENST00000573577 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
RPAIN-213ENST00000573577 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
RPAIN-213ENST00000573577 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
RPAIN-213ENST00000573577 MT4P47944 62 aa4.48□□□□□ -1.69
RPAIN-213ENST00000573577 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.7
RPAIN-213ENST00000573577 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
RPAIN-213ENST00000573577 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
RPAIN-213ENST00000573577 AHNAK2Q8IVF2 5795 aa4.3□□□□□ -1.72
RPAIN-213ENST00000573577 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.25□□□□□ -1.73
RPAIN-213ENST00000573577 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
RPAIN-213ENST00000573577 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
RPAIN-213ENST00000573577 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
RPAIN-213ENST00000573577 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
RPAIN-213ENST00000573577 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
RPAIN-213ENST00000573577 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
RPAIN-213ENST00000573577 KRTAP5-10Q6L8G5 202 aa4.16□□□□□ -1.74
RPAIN-213ENST00000573577 MT1AP04731 61 aa4.12□□□□□ -1.75
RPAIN-213ENST00000573577 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
RPAIN-213ENST00000573577 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
RPAIN-213ENST00000573577 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
RPAIN-213ENST00000573577 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
RPAIN-213ENST00000573577 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
RPAIN-213ENST00000573577 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
RPAIN-213ENST00000573577 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
RPAIN-213ENST00000573577 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.83
RPAIN-213ENST00000573577 INE1O15225 51 aa3.59□□□□□ -1.83
RPAIN-213ENST00000573577 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
RPAIN-213ENST00000573577 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
RPAIN-213ENST00000573577 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
RPAIN-213ENST00000573577 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
RPAIN-213ENST00000573577 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
RPAIN-213ENST00000573577 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
RPAIN-213ENST00000573577 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
RPAIN-213ENST00000573577 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
RPAIN-213ENST00000573577 PRM1P04553 51 aa2.5□□□□□ -2.01
RPAIN-213ENST00000573577 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
RPAIN-213ENST00000573577 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
RPAIN-213ENST00000573577 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
RPAIN-213ENST00000573577 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 8.2 ms