RNA–Protein interactions for RNA: ENST00000573559.3

ABR-221, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-221ENST00000573559 LCE3BQ5TA77 95 aa7.71□□□□□ -1.18
ABR-221ENST00000573559 LCE5AQ5TCM9 118 aa7.69□□□□□ -1.18
ABR-221ENST00000573559 KRTAP25-1Q3LHN0 102 aa7.6□□□□□ -1.19
ABR-221ENST00000573559 MT1GP13640 62 aa7.56□□□□□ -1.2
ABR-221ENST00000573559 MT1LQ93083 61 aa7.55□□□□□ -1.2
ABR-221ENST00000573559 PP632Q6XCG6 107 aa7.53□□□□□ -1.2
ABR-221ENST00000573559 KRTAP12-3P60328 96 aa7.49□□□□□ -1.21
ABR-221ENST00000573559 DSTQ03001 7570 aaKnown RBP7.47□□□□□ -1.21
ABR-221ENST00000573559 MT1MQ8N339 61 aa7.46□□□□□ -1.22
ABR-221ENST00000573559 CDC42SE1Q9NRR8 79 aa7.44□□□□□ -1.22
ABR-221ENST00000573559 GPR98Q8WXG9 6306 aa7.4□□□□□ -1.22
ABR-221ENST00000573559 ROMO1P60602 79 aa7.32□□□□□ -1.24
ABR-221ENST00000573559 KRTAP4-3Q9BYR4 195 aa7.3□□□□□ -1.24
ABR-221ENST00000573559 KRTAP23-1A1A580 65 aa7.28□□□□□ -1.24
ABR-221ENST00000573559 KRTAP4-7Q9BYR0 210 aa7.21□□□□□ -1.26
ABR-221ENST00000573559 KRTAP4-9Q9BYQ8 210 aa7.1□□□□□ -1.27
ABR-221ENST00000573559 KRTAP15-1Q3LI76 137 aa7.08□□□□□ -1.28
ABR-221ENST00000573559 LCE4AQ5TA78 99 aa7.02□□□□□ -1.29
ABR-221ENST00000573559 KRTAP19-4Q3LI73 84 aa7□□□□□ -1.29
ABR-221ENST00000573559 BRK1Q8WUW1 75 aa6.98□□□□□ -1.29
ABR-221ENST00000573559 LCE1DQ5T752 114 aa6.96□□□□□ -1.3
ABR-221ENST00000573559 MT4P47944 62 aa6.95□□□□□ -1.3
ABR-221ENST00000573559 LCE3CQ5T5A8 94 aa6.91□□□□□ -1.3
ABR-221ENST00000573559 KRTAP5-4Q6L8H1 288 aa6.91□□□□□ -1.3
ABR-221ENST00000573559 LOC100996750A0A140TA64 210 aa6.83□□□□□ -1.32
ABR-221ENST00000573559 HMCN1Q96RW7 5635 aa6.79□□□□□ -1.32
ABR-221ENST00000573559 KRTAP5-5Q701N2 237 aaPredicted RBP6.78□□□□□ -1.32
ABR-221ENST00000573559 KRTAP4-6Q9BYQ5 205 aa6.74□□□□□ -1.33
ABR-221ENST00000573559 AHNAK2Q8IVF2 5795 aa6.68□□□□□ -1.34
ABR-221ENST00000573559 KRTAP5-10Q6L8G5 202 aa6.61□□□□□ -1.35
ABR-221ENST00000573559 KRTAP12-4P60329 112 aa6.57□□□□□ -1.36
ABR-221ENST00000573559 PMAIP1Q13794 54 aa6.55□□□□□ -1.36
ABR-221ENST00000573559 KRTAP20-2Q3LI61 65 aa6.54□□□□□ -1.36
ABR-221ENST00000573559 SPRR5A0A1B0GTR4 108 aa6.51□□□□□ -1.37
ABR-221ENST00000573559 SYNE1Q8NF91 8797 aaKnown RBP6.51□□□□□ -1.37
ABR-221ENST00000573559 KRTAP9-6A8MVA2 160 aa6.5□□□□□ -1.37
ABR-221ENST00000573559 KRTAP5-7Q6L8G8 165 aa6.45□□□□□ -1.38
ABR-221ENST00000573559 MT1AP04731 61 aa6.43□□□□□ -1.38
ABR-221ENST00000573559 KRTAP6-1Q3LI64 71 aa6.38□□□□□ -1.39
ABR-221ENST00000573559 KRTAP5-3Q6L8H2 238 aa6.31□□□□□ -1.4
ABR-221ENST00000573559 PRAC1Q96KF2 57 aa6.28□□□□□ -1.4
ABR-221ENST00000573559 PRO0628Q9UI54 55 aa6.25□□□□□ -1.41
ABR-221ENST00000573559 KRTAP9-4Q9BYQ2 154 aa6.17□□□□□ -1.42
ABR-221ENST00000573559 KRTAP5-2Q701N4 177 aa6.1□□□□□ -1.43
ABR-221ENST00000573559 KRTAP6-2Q3LI66 62 aa6.04□□□□□ -1.44
ABR-221ENST00000573559 KTN1-AS1Q86SY8 53 aa5.95□□□□□ -1.46
ABR-221ENST00000573559 KRTAP4-11Q9BYQ6 195 aa5.89□□□□□ -1.47
ABR-221ENST00000573559 MT3P25713 68 aa5.87□□□□□ -1.47
ABR-221ENST00000573559 SVIPQ8NHG7 77 aa5.75□□□□□ -1.49
ABR-221ENST00000573559 OBSCNQ5VST9 7968 aa5.7□□□□□ -1.5
ABR-221ENST00000573559 KRTAP5-8O75690 187 aa5.68□□□□□ -1.5
ABR-221ENST00000573559 AHNAKQ09666 5890 aaKnown RBP5.68□□□□□ -1.5
ABR-221ENST00000573559 MUC5ACP98088 5654 aa5.62□□□□□ -1.51
ABR-221ENST00000573559 MUC5BQ9HC84 5762 aaPredicted RBP5.6□□□□□ -1.51
ABR-221ENST00000573559 KRTAP5-1Q6L8H4 278 aa5.43□□□□□ -1.54
ABR-221ENST00000573559 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
ABR-221ENST00000573559 LCE1EQ5T753 118 aa5.28□□□□□ -1.56
ABR-221ENST00000573559 LUZP6Q538Z0 58 aa5.26□□□□□ -1.57
ABR-221ENST00000573559 LCE3DQ9BYE3 92 aa5.04□□□□□ -1.6
ABR-221ENST00000573559 LCE1BQ5T7P3 118 aa5.03□□□□□ -1.6
ABR-221ENST00000573559 KRTAP4-2Q9BYR5 136 aa4.99□□□□□ -1.61
ABR-221ENST00000573559 LCE1CQ5T751 118 aa4.91□□□□□ -1.62
ABR-221ENST00000573559 LCE3EQ5T5B0 92 aa4.79□□□□□ -1.64
ABR-221ENST00000573559 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
ABR-221ENST00000573559 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.7
ABR-221ENST00000573559 NDUFAF8A1L188 74 aa4.45□□□□□ -1.7
ABR-221ENST00000573559 KRTAP5-11Q6L8G4 156 aa4.43□□□□□ -1.7
ABR-221ENST00000573559 LCE1FQ5T754 118 aa4.23□□□□□ -1.73
ABR-221ENST00000573559 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
ABR-221ENST00000573559 H3BS24 57 aa4.15□□□□□ -1.75
ABR-221ENST00000573559 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
ABR-221ENST00000573559 PHGR1C9JFL3 82 aa3.87□□□□□ -1.79
ABR-221ENST00000573559 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
ABR-221ENST00000573559 PRM1P04553 51 aa3.78□□□□□ -1.8
ABR-221ENST00000573559 INE1O15225 51 aa3.58□□□□□ -1.84
ABR-221ENST00000573559 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
ABR-221ENST00000573559 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
ABR-221ENST00000573559 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 142.4 ms