RNA–Protein interactions for RNA: ENST00000570086.5

CMC2-222, Transcript of C-X9-C motif containing 2, humanhuman

TSL 3

Gene CMC2, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC2-222ENST00000570086 KRTAP4-9Q9BYQ8 210 aa5.93□□□□□ -1.46
CMC2-222ENST00000570086 SYNE2Q8WXH0 6885 aaKnown RBP5.9□□□□□ -1.46
CMC2-222ENST00000570086 KRTAP19-5Q3LI72 72 aa5.86□□□□□ -1.47
CMC2-222ENST00000570086 KRTAP19-7Q3SYF9 63 aa5.86□□□□□ -1.47
CMC2-222ENST00000570086 SPRR2FQ96RM1 72 aa5.86□□□□□ -1.47
CMC2-222ENST00000570086 KTN1-AS1Q86SY8 53 aa5.84□□□□□ -1.47
CMC2-222ENST00000570086 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
CMC2-222ENST00000570086 MT1EP04732 61 aa5.79□□□□□ -1.48
CMC2-222ENST00000570086 PRAC1Q96KF2 57 aa5.77□□□□□ -1.49
CMC2-222ENST00000570086 LCE5AQ5TCM9 118 aa5.76□□□□□ -1.49
CMC2-222ENST00000570086 KRTAP4-2Q9BYR5 136 aa5.76□□□□□ -1.49
CMC2-222ENST00000570086 KRTAP4-11Q9BYQ6 195 aa5.74□□□□□ -1.49
CMC2-222ENST00000570086 LCE1AQ5T7P2 110 aa5.65□□□□□ -1.5
CMC2-222ENST00000570086 SPRR2EP22531 72 aa5.64□□□□□ -1.51
CMC2-222ENST00000570086 SPRR2BP35325 72 aa5.64□□□□□ -1.51
CMC2-222ENST00000570086 SPRR2AP35326 72 aa5.64□□□□□ -1.51
CMC2-222ENST00000570086 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
CMC2-222ENST00000570086 KRTAP19-3Q7Z4W3 81 aa5.63□□□□□ -1.51
CMC2-222ENST00000570086 MT1LQ93083 61 aa5.63□□□□□ -1.51
CMC2-222ENST00000570086 MUC12Q9UKN1 5478 aa5.59□□□□□ -1.51
CMC2-222ENST00000570086 MT1GP13640 62 aa5.57□□□□□ -1.52
CMC2-222ENST00000570086 NEBP20929 6669 aa5.56□□□□□ -1.52
CMC2-222ENST00000570086 KRTAP20-1Q3LI63 56 aa5.49□□□□□ -1.53
CMC2-222ENST00000570086 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
CMC2-222ENST00000570086 MDN1Q9NU22 5596 aa5.47□□□□□ -1.53
CMC2-222ENST00000570086 MT1MQ8N339 61 aa5.47□□□□□ -1.53
CMC2-222ENST00000570086 SPRR2DP22532 72 aa5.45□□□□□ -1.54
CMC2-222ENST00000570086 LCE3CQ5T5A8 94 aa5.4□□□□□ -1.54
CMC2-222ENST00000570086 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
CMC2-222ENST00000570086 KRTAP2-3P0C7H8 128 aa5.26□□□□□ -1.57
CMC2-222ENST00000570086 KRTAP2-4Q9BYR9 128 aa5.26□□□□□ -1.57
CMC2-222ENST00000570086 SPRR5A0A1B0GTR4 108 aa5.13□□□□□ -1.59
CMC2-222ENST00000570086 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
CMC2-222ENST00000570086 KRTAP2-1Q9BYU5 128 aa5.13□□□□□ -1.59
CMC2-222ENST00000570086 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
CMC2-222ENST00000570086 DSTQ03001 7570 aaKnown RBP5.05□□□□□ -1.6
CMC2-222ENST00000570086 KRTAP5-3Q6L8H2 238 aa5.03□□□□□ -1.6
CMC2-222ENST00000570086 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
CMC2-222ENST00000570086 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
CMC2-222ENST00000570086 LUZP6Q538Z0 58 aa4.82□□□□□ -1.64
CMC2-222ENST00000570086 MT1AP04731 61 aa4.81□□□□□ -1.64
CMC2-222ENST00000570086 GPR98Q8WXG9 6306 aa4.8□□□□□ -1.64
CMC2-222ENST00000570086 KRTAP6-1Q3LI64 71 aa4.73□□□□□ -1.65
CMC2-222ENST00000570086 MT4P47944 62 aa4.7□□□□□ -1.66
CMC2-222ENST00000570086 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
CMC2-222ENST00000570086 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
CMC2-222ENST00000570086 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
CMC2-222ENST00000570086 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
CMC2-222ENST00000570086 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
CMC2-222ENST00000570086 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.71
CMC2-222ENST00000570086 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
CMC2-222ENST00000570086 KRTAP5-2Q701N4 177 aa4.39□□□□□ -1.71
CMC2-222ENST00000570086 MT3P25713 68 aa4.37□□□□□ -1.71
CMC2-222ENST00000570086 KRTAP5-10Q6L8G5 202 aa4.3□□□□□ -1.72
CMC2-222ENST00000570086 KRTAP5-7Q6L8G8 165 aa4.16□□□□□ -1.74
CMC2-222ENST00000570086 A0A0A0MQY5 61 aa4.05□□□□□ -1.76
CMC2-222ENST00000570086 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
CMC2-222ENST00000570086 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.78
CMC2-222ENST00000570086 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
CMC2-222ENST00000570086 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
CMC2-222ENST00000570086 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
CMC2-222ENST00000570086 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
CMC2-222ENST00000570086 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
CMC2-222ENST00000570086 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
CMC2-222ENST00000570086 INE1O15225 51 aa3.72□□□□□ -1.81
CMC2-222ENST00000570086 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
CMC2-222ENST00000570086 MUC5BQ9HC84 5762 aaPredicted RBP3.67□□□□□ -1.82
CMC2-222ENST00000570086 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
CMC2-222ENST00000570086 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
CMC2-222ENST00000570086 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
CMC2-222ENST00000570086 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
CMC2-222ENST00000570086 PRM1P04553 51 aa3.22□□□□□ -1.89
CMC2-222ENST00000570086 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
CMC2-222ENST00000570086 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
CMC2-222ENST00000570086 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
CMC2-222ENST00000570086 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.04
CMC2-222ENST00000570086 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
CMC2-222ENST00000570086 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 136.7 ms