RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 GPR98Q8WXG9 6306 aa4.58□□□□□ -1.68
SCAMP2-212ENST00000569904 A0A0D9SG42 100 aa4.51□□□□□ -1.69
SCAMP2-212ENST00000569904 MT1GP13640 62 aa4.51□□□□□ -1.69
SCAMP2-212ENST00000569904 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
SCAMP2-212ENST00000569904 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
SCAMP2-212ENST00000569904 KRTAP19-5Q3LI72 72 aa4.48□□□□□ -1.69
SCAMP2-212ENST00000569904 KRTAP12-1P59990 96 aa4.47□□□□□ -1.69
SCAMP2-212ENST00000569904 A0A1B0GU33 70 aa4.46□□□□□ -1.7
SCAMP2-212ENST00000569904 SPINT4Q6UDR6 99 aa4.45□□□□□ -1.7
SCAMP2-212ENST00000569904 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
SCAMP2-212ENST00000569904 LCE1DQ5T752 114 aa4.44□□□□□ -1.7
SCAMP2-212ENST00000569904 MT1MQ8N339 61 aa4.42□□□□□ -1.7
SCAMP2-212ENST00000569904 HMCN1Q96RW7 5635 aa4.42□□□□□ -1.7
SCAMP2-212ENST00000569904 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
SCAMP2-212ENST00000569904 MT1LQ93083 61 aa4.4□□□□□ -1.71
SCAMP2-212ENST00000569904 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.71
SCAMP2-212ENST00000569904 MT4P47944 62 aa4.32□□□□□ -1.72
SCAMP2-212ENST00000569904 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
SCAMP2-212ENST00000569904 LCE3AQ5TA76 89 aa4.31□□□□□ -1.72
SCAMP2-212ENST00000569904 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
SCAMP2-212ENST00000569904 AHNAK2Q8IVF2 5795 aa4.29□□□□□ -1.72
SCAMP2-212ENST00000569904 TNP1P09430 55 aa4.28□□□□□ -1.72
SCAMP2-212ENST00000569904 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
SCAMP2-212ENST00000569904 K7ERS5 55 aa4.25□□□□□ -1.73
SCAMP2-212ENST00000569904 ROMO1P60602 79 aa4.22□□□□□ -1.73
SCAMP2-212ENST00000569904 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
SCAMP2-212ENST00000569904 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
SCAMP2-212ENST00000569904 KRTAP12-3P60328 96 aa4.15□□□□□ -1.75
SCAMP2-212ENST00000569904 KRTAP4-7Q9BYR0 210 aa4.14□□□□□ -1.75
SCAMP2-212ENST00000569904 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
SCAMP2-212ENST00000569904 KRTAP5-7Q6L8G8 165 aa4.08□□□□□ -1.76
SCAMP2-212ENST00000569904 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
SCAMP2-212ENST00000569904 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
SCAMP2-212ENST00000569904 SPRR5A0A1B0GTR4 108 aa4.06□□□□□ -1.76
SCAMP2-212ENST00000569904 H3BS24 57 aa4.06□□□□□ -1.76
SCAMP2-212ENST00000569904 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
SCAMP2-212ENST00000569904 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
SCAMP2-212ENST00000569904 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
SCAMP2-212ENST00000569904 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
SCAMP2-212ENST00000569904 LOC100996750A0A140TA64 210 aa3.93□□□□□ -1.78
SCAMP2-212ENST00000569904 KRTAP23-1A1A580 65 aa3.89□□□□□ -1.79
SCAMP2-212ENST00000569904 LCE3CQ5T5A8 94 aa3.82□□□□□ -1.8
SCAMP2-212ENST00000569904 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
SCAMP2-212ENST00000569904 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
SCAMP2-212ENST00000569904 MT1AP04731 61 aa3.75□□□□□ -1.81
SCAMP2-212ENST00000569904 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
SCAMP2-212ENST00000569904 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
SCAMP2-212ENST00000569904 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
SCAMP2-212ENST00000569904 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
SCAMP2-212ENST00000569904 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
SCAMP2-212ENST00000569904 KRTAP9-6A8MVA2 160 aa3.62□□□□□ -1.83
SCAMP2-212ENST00000569904 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
SCAMP2-212ENST00000569904 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
SCAMP2-212ENST00000569904 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
SCAMP2-212ENST00000569904 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
SCAMP2-212ENST00000569904 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
SCAMP2-212ENST00000569904 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
SCAMP2-212ENST00000569904 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
SCAMP2-212ENST00000569904 MT3P25713 68 aa3.43□□□□□ -1.86
SCAMP2-212ENST00000569904 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
SCAMP2-212ENST00000569904 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
SCAMP2-212ENST00000569904 INE1O15225 51 aa3.18□□□□□ -1.9
SCAMP2-212ENST00000569904 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
SCAMP2-212ENST00000569904 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
SCAMP2-212ENST00000569904 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
SCAMP2-212ENST00000569904 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
SCAMP2-212ENST00000569904 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
SCAMP2-212ENST00000569904 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
SCAMP2-212ENST00000569904 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
SCAMP2-212ENST00000569904 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
SCAMP2-212ENST00000569904 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
SCAMP2-212ENST00000569904 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
SCAMP2-212ENST00000569904 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
SCAMP2-212ENST00000569904 PRM1P04553 51 aa2.22□□□□□ -2.05
SCAMP2-212ENST00000569904 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
SCAMP2-212ENST00000569904 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
SCAMP2-212ENST00000569904 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
SCAMP2-212ENST00000569904 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 89.4 ms