RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 KRTAP19-5Q3LI72 72 aa5.05□□□□□ -1.6
GTF3C1-211ENST00000569653 C10orf95Q9H7T3 257 aa5.02□□□□□ -1.61
GTF3C1-211ENST00000569653 TNP1P09430 55 aa4.98□□□□□ -1.61
GTF3C1-211ENST00000569653 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
GTF3C1-211ENST00000569653 MT1GP13640 62 aa4.97□□□□□ -1.61
GTF3C1-211ENST00000569653 HMCN1Q96RW7 5635 aa4.95□□□□□ -1.62
GTF3C1-211ENST00000569653 MT1MQ8N339 61 aa4.95□□□□□ -1.62
GTF3C1-211ENST00000569653 A6NED7 52 aa4.94□□□□□ -1.62
GTF3C1-211ENST00000569653 MT1LQ93083 61 aa4.93□□□□□ -1.62
GTF3C1-211ENST00000569653 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
GTF3C1-211ENST00000569653 MT4P47944 62 aa4.88□□□□□ -1.63
GTF3C1-211ENST00000569653 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
GTF3C1-211ENST00000569653 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
GTF3C1-211ENST00000569653 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
GTF3C1-211ENST00000569653 AHNAK2Q8IVF2 5795 aa4.86□□□□□ -1.63
GTF3C1-211ENST00000569653 K7ERS5 55 aa4.85□□□□□ -1.63
GTF3C1-211ENST00000569653 KRTAP5-4Q6L8H1 288 aa4.83□□□□□ -1.64
GTF3C1-211ENST00000569653 CDC42SE1Q9NRR8 79 aa4.79□□□□□ -1.64
GTF3C1-211ENST00000569653 KRTAP4-6Q9BYQ5 205 aa4.78□□□□□ -1.64
GTF3C1-211ENST00000569653 KRTAP25-1Q3LHN0 102 aa4.75□□□□□ -1.65
GTF3C1-211ENST00000569653 KRTAP4-7Q9BYR0 210 aa4.75□□□□□ -1.65
GTF3C1-211ENST00000569653 KRTAP5-10Q6L8G5 202 aa4.72□□□□□ -1.65
GTF3C1-211ENST00000569653 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
GTF3C1-211ENST00000569653 ROMO1P60602 79 aa4.63□□□□□ -1.67
GTF3C1-211ENST00000569653 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
GTF3C1-211ENST00000569653 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
GTF3C1-211ENST00000569653 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
GTF3C1-211ENST00000569653 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
GTF3C1-211ENST00000569653 BRK1Q8WUW1 75 aa4.54□□□□□ -1.68
GTF3C1-211ENST00000569653 KRTAP5-7Q6L8G8 165 aa4.53□□□□□ -1.68
GTF3C1-211ENST00000569653 LOC100996750A0A140TA64 210 aa4.5□□□□□ -1.69
GTF3C1-211ENST00000569653 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
GTF3C1-211ENST00000569653 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.7
GTF3C1-211ENST00000569653 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
GTF3C1-211ENST00000569653 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
GTF3C1-211ENST00000569653 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
GTF3C1-211ENST00000569653 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
GTF3C1-211ENST00000569653 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
GTF3C1-211ENST00000569653 PMAIP1Q13794 54 aa4.27□□□□□ -1.73
GTF3C1-211ENST00000569653 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
GTF3C1-211ENST00000569653 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
GTF3C1-211ENST00000569653 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
GTF3C1-211ENST00000569653 MT1AP04731 61 aa4.17□□□□□ -1.74
GTF3C1-211ENST00000569653 KRTAP9-6A8MVA2 160 aa4.13□□□□□ -1.75
GTF3C1-211ENST00000569653 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
GTF3C1-211ENST00000569653 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
GTF3C1-211ENST00000569653 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
GTF3C1-211ENST00000569653 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
GTF3C1-211ENST00000569653 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
GTF3C1-211ENST00000569653 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
GTF3C1-211ENST00000569653 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
GTF3C1-211ENST00000569653 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
GTF3C1-211ENST00000569653 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.77
GTF3C1-211ENST00000569653 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
GTF3C1-211ENST00000569653 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
GTF3C1-211ENST00000569653 MT3P25713 68 aa3.77□□□□□ -1.81
GTF3C1-211ENST00000569653 H3BS24 57 aa3.59□□□□□ -1.83
GTF3C1-211ENST00000569653 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
GTF3C1-211ENST00000569653 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
GTF3C1-211ENST00000569653 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
GTF3C1-211ENST00000569653 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
GTF3C1-211ENST00000569653 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
GTF3C1-211ENST00000569653 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
GTF3C1-211ENST00000569653 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
GTF3C1-211ENST00000569653 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
GTF3C1-211ENST00000569653 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
GTF3C1-211ENST00000569653 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
GTF3C1-211ENST00000569653 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
GTF3C1-211ENST00000569653 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
GTF3C1-211ENST00000569653 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
GTF3C1-211ENST00000569653 INE1O15225 51 aa2.78□□□□□ -1.96
GTF3C1-211ENST00000569653 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
GTF3C1-211ENST00000569653 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
GTF3C1-211ENST00000569653 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
GTF3C1-211ENST00000569653 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
GTF3C1-211ENST00000569653 PRM1P04553 51 aa2.4□□□□□ -2.03
GTF3C1-211ENST00000569653 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
GTF3C1-211ENST00000569653 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 79.8 ms