RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 LAMA2P24043 3122 aaKnown RBP0.04□□□□□ -2.4
UBR1-209ENST00000569243 ATMQ13315 3056 aa0.03□□□□□ -2.4
UBR1-209ENST00000569243 CEP295Q9C0D2 2601 aa0.02□□□□□ -2.41
UBR1-209ENST00000569243 ITPR2Q14571 2701 aa0.02□□□□□ -2.41
UBR1-209ENST00000569243 CSMD2Q7Z408 3487 aa0.02□□□□□ -2.41
UBR1-209ENST00000569243 K7EIM0 57 aa0.02□□□□□ -2.41
UBR1-209ENST00000569243 DEFB133Q30KQ1 61 aa0.02□□□□□ -2.41
UBR1-209ENST00000569243 NIPBLQ6KC79 2804 aaeCLIP0.02□□□□□ -2.41
UBR1-209ENST00000569243 PRUNE2Q8WUY3 3088 aa0.01□□□□□ -2.41
UBR1-209ENST00000569243 EPPK1P58107 5090 aaKnown RBP0.01□□□□□ -2.41
UBR1-209ENST00000569243 A0A096LPF7 62 aa0.01□□□□□ -2.41
UBR1-209ENST00000569243 KRTAP20-2Q3LI61 65 aa0.01□□□□□ -2.41
UBR1-209ENST00000569243 KRTAP6-1Q3LI64 71 aa0.01□□□□□ -2.41
UBR1-209ENST00000569243 TMEM167AQ8TBQ9 72 aa0.01□□□□□ -2.41
UBR1-209ENST00000569243 HERC2O95714 4834 aa0.01□□□□□ -2.41
UBR1-209ENST00000569243 BIRC6Q9NR09 4857 aa0□□□□□ -2.41
UBR1-209ENST00000569243 DSTQ03001 7570 aaKnown RBP-0□□□□□ -2.41
UBR1-209ENST00000569243 MYO15AQ9UKN7 3530 aa-0□□□□□ -2.41
UBR1-209ENST00000569243 CENPEQ02224 2701 aa-0□□□□□ -2.41
UBR1-209ENST00000569243 RNF213Q63HN8 5207 aa-0.01□□□□□ -2.41
UBR1-209ENST00000569243 MT1GP13640 62 aa-0.01□□□□□ -2.41
UBR1-209ENST00000569243 MUC3AQ02505 3323 aa-0.01□□□□□ -2.41
UBR1-209ENST00000569243 MKI67P46013 3256 aaKnown RBP-0.01□□□□□ -2.41
UBR1-209ENST00000569243 DNAH12Q6ZR08 3092 aa-0.01□□□□□ -2.41
UBR1-209ENST00000569243 MT1HP80294 61 aa-0.02□□□□□ -2.41
UBR1-209ENST00000569243 WDFY4Q6ZS81 3184 aa-0.02□□□□□ -2.41
UBR1-209ENST00000569243 FRYLO94915 3013 aa-0.02□□□□□ -2.41
UBR1-209ENST00000569243 HYDINQ4G0P3 5121 aa-0.02□□□□□ -2.41
UBR1-209ENST00000569243 XIRP2A4UGR9 3374 aa-0.02□□□□□ -2.41
UBR1-209ENST00000569243 EYSQ5T1H1 3165 aa-0.02□□□□□ -2.41
UBR1-209ENST00000569243 H3BUX3 64 aa-0.03□□□□□ -2.41
UBR1-209ENST00000569243 LINC01556Q5JQF7 62 aa-0.03□□□□□ -2.41
UBR1-209ENST00000569243 RYR2Q92736 4967 aa-0.04□□□□□ -2.42
UBR1-209ENST00000569243 MT1EP04732 61 aa-0.04□□□□□ -2.42
UBR1-209ENST00000569243 HTN3P15516 51 aa-0.04□□□□□ -2.42
UBR1-209ENST00000569243 MT1XP80297 61 aa-0.04□□□□□ -2.42
UBR1-209ENST00000569243 DEFB124Q8NES8 71 aa-0.04□□□□□ -2.42
UBR1-209ENST00000569243 MT1LQ93083 61 aa-0.04□□□□□ -2.42
UBR1-209ENST00000569243 PCNTO95613 3336 aa-0.05□□□□□ -2.42
UBR1-209ENST00000569243 RYR3Q15413 4870 aa-0.05□□□□□ -2.42
UBR1-209ENST00000569243 STATHP02808 62 aa-0.05□□□□□ -2.42
UBR1-209ENST00000569243 CD52P31358 61 aa-0.05□□□□□ -2.42
UBR1-209ENST00000569243 MT4P47944 62 aa-0.05□□□□□ -2.42
UBR1-209ENST00000569243 USP34Q70CQ2 3546 aa-0.05□□□□□ -2.42
UBR1-209ENST00000569243 FREM2Q5SZK8 3169 aa-0.06□□□□□ -2.42
UBR1-209ENST00000569243 CEP350Q5VT06 3117 aa-0.06□□□□□ -2.42
UBR1-209ENST00000569243 BOD1L1Q8NFC6 3051 aa-0.06□□□□□ -2.42
UBR1-209ENST00000569243 DCHS1Q96JQ0 3298 aa-0.06□□□□□ -2.42
UBR1-209ENST00000569243 DEFB108BQ8NET1 73 aa-0.06□□□□□ -2.42
UBR1-209ENST00000569243 WDFY3Q8IZQ1 3526 aa-0.07□□□□□ -2.42
UBR1-209ENST00000569243 KIAA1109Q2LD37 5005 aa-0.08□□□□□ -2.42
UBR1-209ENST00000569243 RPS29P62273 56 aaKnown RBP-0.08□□□□□ -2.42
UBR1-209ENST00000569243 ASPMQ8IZT6 3477 aa-0.08□□□□□ -2.42
UBR1-209ENST00000569243 NEBP20929 6669 aa-0.08□□□□□ -2.42
UBR1-209ENST00000569243 MT1MQ8N339 61 aa-0.09□□□□□ -2.42
UBR1-209ENST00000569243 ABCA13Q86UQ4 5058 aa-0.1□□□□□ -2.42
UBR1-209ENST00000569243 MT2AP02795 61 aa-0.1□□□□□ -2.43
UBR1-209ENST00000569243 MT1HL1P0DM35 61 aa-0.11□□□□□ -2.43
UBR1-209ENST00000569243 LOC400499M0QZD8 3231 aa-0.11□□□□□ -2.43
UBR1-209ENST00000569243 CFAP47Q6ZTR5 3102 aa-0.12□□□□□ -2.43
UBR1-209ENST00000569243 EP400Q96L91 3159 aa-0.12□□□□□ -2.43
UBR1-209ENST00000569243 SPEGQ15772 3267 aa-0.12□□□□□ -2.43
UBR1-209ENST00000569243 UNC80Q8N2C7 3258 aa-0.12□□□□□ -2.43
UBR1-209ENST00000569243 DNAH14Q0VDD8 3507 aa-0.13□□□□□ -2.43
UBR1-209ENST00000569243 BRCA2P51587 3418 aa-0.15□□□□□ -2.43
UBR1-209ENST00000569243 MT1BP07438 61 aa-0.15□□□□□ -2.43
UBR1-209ENST00000569243 CENPFP49454 3210 aa-0.17□□□□□ -2.44
UBR1-209ENST00000569243 UTRNP46939 3433 aa-0.17□□□□□ -2.44
UBR1-209ENST00000569243 VCANP13611 3396 aa-0.18□□□□□ -2.44
UBR1-209ENST00000569243 MT1FP04733 61 aa-0.18□□□□□ -2.44
UBR1-209ENST00000569243 Q9Y3F1 56 aa-0.19□□□□□ -2.44
UBR1-209ENST00000569243 VPS13AQ96RL7 3174 aa-0.19□□□□□ -2.44
UBR1-209ENST00000569243 COX14Q96I36 57 aa-0.21□□□□□ -2.44
UBR1-209ENST00000569243 CDH23Q9H251 3354 aa-0.22□□□□□ -2.44
UBR1-209ENST00000569243 KRTAP19-2Q3LHN2 52 aa-0.24□□□□□ -2.45
UBR1-209ENST00000569243 GOLGB1Q14789 3259 aaKnown RBP-0.25□□□□□ -2.45
UBR1-209ENST00000569243 KRTAP20-1Q3LI63 56 aa-0.28□□□□□ -2.45
UBR1-209ENST00000569243 KRTAP19-6Q3LI70 58 aa-0.28□□□□□ -2.45
Retrieved 78 of 20,778 RNA–protein pairs in 69.7 ms