RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 KRTAP4-3Q9BYR4 195 aa6.96□□□□□ -1.29
DENND4A-208ENST00000568515 KRTAP19-6Q3LI70 58 aa6.95□□□□□ -1.3
DENND4A-208ENST00000568515 MT1GP13640 62 aa6.91□□□□□ -1.3
DENND4A-208ENST00000568515 LCE2DQ5TA82 110 aaPredicted RBP6.86□□□□□ -1.31
DENND4A-208ENST00000568515 MT1MQ8N339 61 aa6.83□□□□□ -1.32
DENND4A-208ENST00000568515 KRTAP19-3Q7Z4W3 81 aa6.8□□□□□ -1.32
DENND4A-208ENST00000568515 FCGBPQ9Y6R7 5405 aaPredicted RBP6.77□□□□□ -1.33
DENND4A-208ENST00000568515 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
DENND4A-208ENST00000568515 MUC12Q9UKN1 5478 aa6.73□□□□□ -1.33
DENND4A-208ENST00000568515 FSIP2Q5CZC0 6907 aa6.72□□□□□ -1.33
DENND4A-208ENST00000568515 KRTAP12-4P60329 112 aa6.71□□□□□ -1.34
DENND4A-208ENST00000568515 LCE5AQ5TCM9 118 aa6.53□□□□□ -1.36
DENND4A-208ENST00000568515 DSTQ03001 7570 aaKnown RBP6.48□□□□□ -1.37
DENND4A-208ENST00000568515 LCE3BQ5TA77 95 aa6.45□□□□□ -1.38
DENND4A-208ENST00000568515 SPRR2FQ96RM1 72 aa6.41□□□□□ -1.38
DENND4A-208ENST00000568515 KRTAP4-9Q9BYQ8 210 aa6.37□□□□□ -1.39
DENND4A-208ENST00000568515 MT1AP04731 61 aa6.33□□□□□ -1.4
DENND4A-208ENST00000568515 KRTAP6-1Q3LI64 71 aa6.27□□□□□ -1.41
DENND4A-208ENST00000568515 SYNE1Q8NF91 8797 aaKnown RBP6.24□□□□□ -1.41
DENND4A-208ENST00000568515 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
DENND4A-208ENST00000568515 LCE3DQ9BYE3 92 aa6.17□□□□□ -1.42
DENND4A-208ENST00000568515 MACF1Q9UPN3 7388 aaKnown RBP6.14□□□□□ -1.43
DENND4A-208ENST00000568515 LCE3EQ5T5B0 92 aa6.12□□□□□ -1.43
DENND4A-208ENST00000568515 KRTAP5-5Q701N2 237 aaPredicted RBP6.04□□□□□ -1.44
DENND4A-208ENST00000568515 KRTAP9-7A8MTY7 169 aa6.01□□□□□ -1.45
DENND4A-208ENST00000568515 MDN1Q9NU22 5596 aa5.97□□□□□ -1.45
DENND4A-208ENST00000568515 PRM1P04553 51 aa5.96□□□□□ -1.45
DENND4A-208ENST00000568515 LCE1AQ5T7P2 110 aa5.93□□□□□ -1.46
DENND4A-208ENST00000568515 SYNE2Q8WXH0 6885 aaKnown RBP5.93□□□□□ -1.46
DENND4A-208ENST00000568515 KRTAP5-9P26371 169 aa5.82□□□□□ -1.48
DENND4A-208ENST00000568515 KRTAP9-4Q9BYQ2 154 aa5.8□□□□□ -1.48
DENND4A-208ENST00000568515 SPRR2EP22531 72 aa5.74□□□□□ -1.49
DENND4A-208ENST00000568515 SPRR2BP35325 72 aa5.74□□□□□ -1.49
DENND4A-208ENST00000568515 SPRR2AP35326 72 aa5.74□□□□□ -1.49
DENND4A-208ENST00000568515 KRTAP6-2Q3LI66 62 aa5.72□□□□□ -1.49
DENND4A-208ENST00000568515 MT3P25713 68 aa5.54□□□□□ -1.52
DENND4A-208ENST00000568515 SPRR2DP22532 72 aa5.48□□□□□ -1.53
DENND4A-208ENST00000568515 KRTAP6-3Q3LI67 103 aa5.47□□□□□ -1.53
DENND4A-208ENST00000568515 OBSCNQ5VST9 7968 aa5.42□□□□□ -1.54
DENND4A-208ENST00000568515 KRTAP9-6A0A140TA67 174 aa5.37□□□□□ -1.55
DENND4A-208ENST00000568515 KRTAP2-2Q9BYT5 123 aa5.29□□□□□ -1.56
DENND4A-208ENST00000568515 KRTAP5-4Q6L8H1 288 aa5.13□□□□□ -1.59
DENND4A-208ENST00000568515 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.99□□□□□ -1.61
DENND4A-208ENST00000568515 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
DENND4A-208ENST00000568515 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
DENND4A-208ENST00000568515 MT4P47944 62 aa4.85□□□□□ -1.63
DENND4A-208ENST00000568515 KRTAP20-2Q3LI61 65 aa4.82□□□□□ -1.64
DENND4A-208ENST00000568515 NEBP20929 6669 aa4.76□□□□□ -1.65
DENND4A-208ENST00000568515 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
DENND4A-208ENST00000568515 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
DENND4A-208ENST00000568515 LCE1DQ5T752 114 aa4.59□□□□□ -1.67
DENND4A-208ENST00000568515 HMCN1Q96RW7 5635 aa4.58□□□□□ -1.68
DENND4A-208ENST00000568515 KRTAP5-3Q6L8H2 238 aa4.57□□□□□ -1.68
DENND4A-208ENST00000568515 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
DENND4A-208ENST00000568515 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
DENND4A-208ENST00000568515 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
DENND4A-208ENST00000568515 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
DENND4A-208ENST00000568515 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
DENND4A-208ENST00000568515 KRTAP5-1Q6L8H4 278 aa4.39□□□□□ -1.71
DENND4A-208ENST00000568515 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
DENND4A-208ENST00000568515 LCE1CQ5T751 118 aa4.21□□□□□ -1.73
DENND4A-208ENST00000568515 KRTAP21-2Q3LI59 83 aa4.03□□□□□ -1.76
DENND4A-208ENST00000568515 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
DENND4A-208ENST00000568515 KRTAP21-1Q3LI58 79 aa3.78□□□□□ -1.8
DENND4A-208ENST00000568515 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
DENND4A-208ENST00000568515 KRTAP5-7Q6L8G8 165 aa3.71□□□□□ -1.82
DENND4A-208ENST00000568515 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
DENND4A-208ENST00000568515 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
DENND4A-208ENST00000568515 MUC19Q7Z5P9 8384 aa3.56□□□□□ -1.84
DENND4A-208ENST00000568515 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
DENND4A-208ENST00000568515 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.86
DENND4A-208ENST00000568515 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
DENND4A-208ENST00000568515 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
DENND4A-208ENST00000568515 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
DENND4A-208ENST00000568515 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
DENND4A-208ENST00000568515 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
DENND4A-208ENST00000568515 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
DENND4A-208ENST00000568515 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 66.4 ms