RNA–Protein interactions for RNA: ENST00000567205.1

FANCA-222, Transcript of FA complementation group A, human

TSL 1 (best)

Gene FANCA, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-222	ENST00000567205	KRTAP19-3	Q7Z4W3	81 aa		6	□□□□□ -1.45
FANCA-222	ENST00000567205	KRTAP25-1	Q3LHN0	102 aa		5.98	□□□□□ -1.45
FANCA-222	ENST00000567205	LCE5A	Q5TCM9	118 aa		5.97	□□□□□ -1.45
FANCA-222	ENST00000567205	PP632	Q6XCG6	107 aa		5.93	□□□□□ -1.46
FANCA-222	ENST00000567205	MT1G	P13640	62 aa		5.9	□□□□□ -1.46
FANCA-222	ENST00000567205	DST	Q03001	7570 aa	Known RBP	5.88	□□□□□ -1.47
FANCA-222	ENST00000567205	CDC42SE1	Q9NRR8	79 aa		5.84	□□□□□ -1.47
FANCA-222	ENST00000567205	MT1L	Q93083	61 aa		5.83	□□□□□ -1.48
FANCA-222	ENST00000567205	KRTAP12-3	P60328	96 aa		5.82	□□□□□ -1.48
FANCA-222	ENST00000567205	KRTAP23-1	A1A580	65 aa		5.79	□□□□□ -1.48
FANCA-222	ENST00000567205	KRTAP4-9	Q9BYQ8	210 aa		5.78	□□□□□ -1.48
FANCA-222	ENST00000567205	MT1M	Q8N339	61 aa		5.76	□□□□□ -1.49
FANCA-222	ENST00000567205	GPR98	Q8WXG9	6306 aa		5.75	□□□□□ -1.49
FANCA-222	ENST00000567205	ROMO1	P60602	79 aa		5.72	□□□□□ -1.49
FANCA-222	ENST00000567205	LCE1D	Q5T752	114 aa		5.66	□□□□□ -1.5
FANCA-222	ENST00000567205	KRTAP19-4	Q3LI73	84 aa		5.64	□□□□□ -1.51
FANCA-222	ENST00000567205	LCE4A	Q5TA78	99 aa		5.64	□□□□□ -1.51
FANCA-222	ENST00000567205	MT4	P47944	62 aa		5.54	□□□□□ -1.52
FANCA-222	ENST00000567205	KRTAP15-1	Q3LI76	137 aa		5.52	□□□□□ -1.53
FANCA-222	ENST00000567205	KRTAP4-3	Q9BYR4	195 aa		5.52	□□□□□ -1.53
FANCA-222	ENST00000567205	KRTAP5-4	Q6L8H1	288 aa		5.5	□□□□□ -1.53
FANCA-222	ENST00000567205	HMCN1	Q96RW7	5635 aa		5.49	□□□□□ -1.53
FANCA-222	ENST00000567205	KRTAP4-7	Q9BYR0	210 aa		5.46	□□□□□ -1.54
FANCA-222	ENST00000567205	BRK1	Q8WUW1	75 aa		5.42	□□□□□ -1.54
FANCA-222	ENST00000567205	KRTAP5-10	Q6L8G5	202 aa		5.38	□□□□□ -1.55
FANCA-222	ENST00000567205	KRTAP4-6	Q9BYQ5	205 aa		5.38	□□□□□ -1.55
FANCA-222	ENST00000567205	LCE3C	Q5T5A8	94 aa		5.37	□□□□□ -1.55
FANCA-222	ENST00000567205	AHNAK2	Q8IVF2	5795 aa		5.35	□□□□□ -1.55
FANCA-222	ENST00000567205	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.25	□□□□□ -1.57
FANCA-222	ENST00000567205	KRTAP5-7	Q6L8G8	165 aa		5.21	□□□□□ -1.58
FANCA-222	ENST00000567205	KRTAP5-3	Q6L8H2	238 aa		5.2	□□□□□ -1.58
FANCA-222	ENST00000567205	KRTAP20-2	Q3LI61	65 aa		5.18	□□□□□ -1.58
FANCA-222	ENST00000567205	SPRR5	A0A1B0GTR4	108 aa		5.17	□□□□□ -1.58
FANCA-222	ENST00000567205	LOC100996750	A0A140TA64	210 aa		5.16	□□□□□ -1.58
FANCA-222	ENST00000567205	KRTAP12-4	P60329	112 aa		5.15	□□□□□ -1.59
FANCA-222	ENST00000567205	PMAIP1	Q13794	54 aa		5.12	□□□□□ -1.59
FANCA-222	ENST00000567205	MT1A	P04731	61 aa		5	□□□□□ -1.61
FANCA-222	ENST00000567205	KRTAP9-6	A8MVA2	160 aa		4.96	□□□□□ -1.62
FANCA-222	ENST00000567205	SYNE1	Q8NF91	8797 aa	Known RBP	4.95	□□□□□ -1.62
FANCA-222	ENST00000567205	PRO0628	Q9UI54	55 aa		4.92	□□□□□ -1.62
FANCA-222	ENST00000567205	KRTAP6-1	Q3LI64	71 aa		4.9	□□□□□ -1.63
FANCA-222	ENST00000567205	KRTAP4-11	Q9BYQ6	195 aa		4.79	□□□□□ -1.64
FANCA-222	ENST00000567205	KRTAP5-2	Q701N4	177 aa		4.78	□□□□□ -1.64
FANCA-222	ENST00000567205	PRAC1	Q96KF2	57 aa		4.78	□□□□□ -1.64
FANCA-222	ENST00000567205	KRTAP9-4	Q9BYQ2	154 aa		4.78	□□□□□ -1.64
FANCA-222	ENST00000567205	KTN1-AS1	Q86SY8	53 aa		4.67	□□□□□ -1.66
FANCA-222	ENST00000567205	KRTAP6-2	Q3LI66	62 aa		4.65	□□□□□ -1.67
FANCA-222	ENST00000567205	KRTAP5-8	O75690	187 aa		4.63	□□□□□ -1.67
FANCA-222	ENST00000567205	MT3	P25713	68 aa		4.59	□□□□□ -1.67
FANCA-222	ENST00000567205	OBSCN	Q5VST9	7968 aa		4.47	□□□□□ -1.69
FANCA-222	ENST00000567205	SVIP	Q8NHG7	77 aa		4.47	□□□□□ -1.69
FANCA-222	ENST00000567205	MUC5AC	P98088	5654 aa		4.46	□□□□□ -1.7
FANCA-222	ENST00000567205	KRTAP4-12	Q9BQ66	201 aa		4.44	□□□□□ -1.7
FANCA-222	ENST00000567205	KRTAP9-9	Q9BYP9	154 aa		4.43	□□□□□ -1.7
FANCA-222	ENST00000567205	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.42	□□□□□ -1.7
FANCA-222	ENST00000567205	AHNAK	Q09666	5890 aa	Known RBP	4.41	□□□□□ -1.7
FANCA-222	ENST00000567205	KRTAP5-1	Q6L8H4	278 aa		4.32	□□□□□ -1.72
FANCA-222	ENST00000567205	LUZP6	Q538Z0	58 aa		4.19	□□□□□ -1.74
FANCA-222	ENST00000567205	LCE1E	Q5T753	118 aa		4.17	□□□□□ -1.74
FANCA-222	ENST00000567205	KRTAP4-2	Q9BYR5	136 aa		4.03	□□□□□ -1.76
FANCA-222	ENST00000567205	LCE3D	Q9BYE3	92 aa		3.93	□□□□□ -1.78
FANCA-222	ENST00000567205	LCE1C	Q5T751	118 aa		3.86	□□□□□ -1.79
FANCA-222	ENST00000567205	LCE1B	Q5T7P3	118 aa		3.86	□□□□□ -1.79
FANCA-222	ENST00000567205	LCE3E	Q5T5B0	92 aa		3.74	□□□□□ -1.81
FANCA-222	ENST00000567205	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.55	□□□□□ -1.84
FANCA-222	ENST00000567205	KRTAP5-11	Q6L8G4	156 aa		3.49	□□□□□ -1.85
FANCA-222	ENST00000567205	NDUFAF8	A1L188	74 aa		3.44	□□□□□ -1.86
FANCA-222	ENST00000567205	LCE1F	Q5T754	118 aa		3.42	□□□□□ -1.86
FANCA-222	ENST00000567205		H3BS24	57 aa		3.31	□□□□□ -1.88
FANCA-222	ENST00000567205	KRTAP21-2	Q3LI59	83 aa		3.22	□□□□□ -1.89
FANCA-222	ENST00000567205	PHGR1	C9JFL3	82 aa		3.13	□□□□□ -1.91
FANCA-222	ENST00000567205		A0A0A0MQY5	61 aa		2.92	□□□□□ -1.94
FANCA-222	ENST00000567205	INE1	O15225	51 aa		2.89	□□□□□ -1.95
FANCA-222	ENST00000567205	PRM1	P04553	51 aa		2.89	□□□□□ -1.95
FANCA-222	ENST00000567205	KRTAP4-4	Q9BYR3	166 aa		2.87	□□□□□ -1.95
FANCA-222	ENST00000567205	MUC19	Q7Z5P9	8384 aa		2.76	□□□□□ -1.97
FANCA-222	ENST00000567205	KRTAP21-1	Q3LI58	79 aa		2.4	□□□□□ -2.03
FANCA-222	ENST00000567205	MUC16	Q8WXI7	14507 aa		1.96	□□□□□ -2.1

Retrieved 78 of 20,778 RNA–protein pairs in 67.3 ms