RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 KRTAP5-9P26371 169 aa2.42□□□□□ -2.02
GINS3-206ENST00000567143 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
GINS3-206ENST00000567143 KRTAP4-7Q9BYR0 210 aa2.41□□□□□ -2.02
GINS3-206ENST00000567143 PRO2289Q9P1D8 64 aa2.41□□□□□ -2.02
GINS3-206ENST00000567143 MUC12Q9UKN1 5478 aa2.4□□□□□ -2.02
GINS3-206ENST00000567143 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
GINS3-206ENST00000567143 LCE3CQ5T5A8 94 aa2.35□□□□□ -2.03
GINS3-206ENST00000567143 KRTAP20-1Q3LI63 56 aa2.34□□□□□ -2.03
GINS3-206ENST00000567143 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.03
GINS3-206ENST00000567143 KRTAP4-12Q9BQ66 201 aa2.33□□□□□ -2.04
GINS3-206ENST00000567143 INE1O15225 51 aa2.31□□□□□ -2.04
GINS3-206ENST00000567143 LCE3BQ5TA77 95 aa2.3□□□□□ -2.04
GINS3-206ENST00000567143 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
GINS3-206ENST00000567143 KRTAP9-4Q9BYQ2 154 aa2.28□□□□□ -2.04
GINS3-206ENST00000567143 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
GINS3-206ENST00000567143 LCE1AQ5T7P2 110 aa2.27□□□□□ -2.05
GINS3-206ENST00000567143 KRTAP19-4Q3LI73 84 aa2.26□□□□□ -2.05
GINS3-206ENST00000567143 KRTAP19-7Q3SYF9 63 aa2.25□□□□□ -2.05
GINS3-206ENST00000567143 MACF1Q9UPN3 7388 aaKnown RBP2.25□□□□□ -2.05
GINS3-206ENST00000567143 SYNE2Q8WXH0 6885 aaKnown RBP2.24□□□□□ -2.05
GINS3-206ENST00000567143 KRTAP4-3Q9BYR4 195 aa2.24□□□□□ -2.05
GINS3-206ENST00000567143 NEBP20929 6669 aa2.21□□□□□ -2.05
GINS3-206ENST00000567143 LCE4AQ5TA78 99 aa2.21□□□□□ -2.06
GINS3-206ENST00000567143 MT1LQ93083 61 aa2.19□□□□□ -2.06
GINS3-206ENST00000567143 MT1GP13640 62 aa2.18□□□□□ -2.06
GINS3-206ENST00000567143 MT1EP04732 61 aa2.17□□□□□ -2.06
GINS3-206ENST00000567143 MDN1Q9NU22 5596 aa2.17□□□□□ -2.06
GINS3-206ENST00000567143 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
GINS3-206ENST00000567143 KRTAP2-3P0C7H8 128 aa2.15□□□□□ -2.07
GINS3-206ENST00000567143 KRTAP2-4Q9BYR9 128 aa2.15□□□□□ -2.07
GINS3-206ENST00000567143 LCE1DQ5T752 114 aa2.15□□□□□ -2.07
GINS3-206ENST00000567143 KRTAP2-1Q9BYU5 128 aa2.13□□□□□ -2.07
GINS3-206ENST00000567143 LCE5AQ5TCM9 118 aa2.13□□□□□ -2.07
GINS3-206ENST00000567143 SPRR2FQ96RM1 72 aa2.12□□□□□ -2.07
GINS3-206ENST00000567143 KRTAP4-9Q9BYQ8 210 aa2.11□□□□□ -2.07
GINS3-206ENST00000567143 SPRR2EP22531 72 aa2.1□□□□□ -2.07
GINS3-206ENST00000567143 SPRR2BP35325 72 aa2.1□□□□□ -2.07
GINS3-206ENST00000567143 SPRR2AP35326 72 aa2.1□□□□□ -2.07
GINS3-206ENST00000567143 KRTAP4-2Q9BYR5 136 aa2.1□□□□□ -2.07
GINS3-206ENST00000567143 KRTAP19-3Q7Z4W3 81 aa2.09□□□□□ -2.08
GINS3-206ENST00000567143 KRTAP2-2Q9BYT5 123 aa2.07□□□□□ -2.08
GINS3-206ENST00000567143 KRTAP12-4P60329 112 aa2.06□□□□□ -2.08
GINS3-206ENST00000567143 SPRR2DP22532 72 aa2.04□□□□□ -2.08
GINS3-206ENST00000567143 MT1MQ8N339 61 aa2.04□□□□□ -2.08
GINS3-206ENST00000567143 KRTAP4-11Q9BYQ6 195 aa2.02□□□□□ -2.09
GINS3-206ENST00000567143 KRTAP5-4Q6L8H1 288 aa2□□□□□ -2.09
GINS3-206ENST00000567143 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
GINS3-206ENST00000567143 KRTAP5-5Q701N2 237 aaPredicted RBP1.95□□□□□ -2.1
GINS3-206ENST00000567143 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
GINS3-206ENST00000567143 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
GINS3-206ENST00000567143 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
GINS3-206ENST00000567143 KRTAP5-3Q6L8H2 238 aa1.89□□□□□ -2.11
GINS3-206ENST00000567143 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
GINS3-206ENST00000567143 LCE3DQ9BYE3 92 aa1.86□□□□□ -2.11
GINS3-206ENST00000567143 PRM1P04553 51 aa1.84□□□□□ -2.11
GINS3-206ENST00000567143 LCE3EQ5T5B0 92 aa1.82□□□□□ -2.12
GINS3-206ENST00000567143 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
GINS3-206ENST00000567143 KRTAP5-2Q701N4 177 aa1.79□□□□□ -2.12
GINS3-206ENST00000567143 MT1AP04731 61 aa1.78□□□□□ -2.12
GINS3-206ENST00000567143 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
GINS3-206ENST00000567143 KRTAP6-2Q3LI66 62 aa1.74□□□□□ -2.13
GINS3-206ENST00000567143 MT4P47944 62 aa1.68□□□□□ -2.14
GINS3-206ENST00000567143 MT3P25713 68 aa1.63□□□□□ -2.15
GINS3-206ENST00000567143 KRTAP5-8O75690 187 aa1.61□□□□□ -2.15
GINS3-206ENST00000567143 LCE1EQ5T753 118 aa1.58□□□□□ -2.16
GINS3-206ENST00000567143 MUC5ACP98088 5654 aa1.58□□□□□ -2.16
GINS3-206ENST00000567143 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
GINS3-206ENST00000567143 LCE1FQ5T754 118 aa1.56□□□□□ -2.16
GINS3-206ENST00000567143 KRTAP5-1Q6L8H4 278 aa1.52□□□□□ -2.17
GINS3-206ENST00000567143 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
GINS3-206ENST00000567143 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.44□□□□□ -2.18
GINS3-206ENST00000567143 LCE1CQ5T751 118 aa1.43□□□□□ -2.18
GINS3-206ENST00000567143 KRTAP5-11Q6L8G4 156 aa1.39□□□□□ -2.19
GINS3-206ENST00000567143 KRTAP4-4Q9BYR3 166 aa1.38□□□□□ -2.19
GINS3-206ENST00000567143 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
GINS3-206ENST00000567143 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
GINS3-206ENST00000567143 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
GINS3-206ENST00000567143 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 90.5 ms