RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 MDN1Q9NU22 5596 aa2.23□□□□□ -2.05
CDH13-209ENST00000567109 KRTAP9-6A0A140TA67 174 aa2.22□□□□□ -2.05
CDH13-209ENST00000567109 MT1GP13640 62 aa2.2□□□□□ -2.06
CDH13-209ENST00000567109 LPAP08519 4548 aa2.16□□□□□ -2.06
CDH13-209ENST00000567109 MT4P47944 62 aa2.15□□□□□ -2.07
CDH13-209ENST00000567109 KRTAP6-3Q3LI67 103 aa2.13□□□□□ -2.07
CDH13-209ENST00000567109 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
CDH13-209ENST00000567109 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
CDH13-209ENST00000567109 SYNE2Q8WXH0 6885 aaKnown RBP2.11□□□□□ -2.07
CDH13-209ENST00000567109 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
CDH13-209ENST00000567109 MT1LQ93083 61 aa2.07□□□□□ -2.08
CDH13-209ENST00000567109 KMT2DO14686 5537 aa2.07□□□□□ -2.08
CDH13-209ENST00000567109 KRTAP19-3Q7Z4W3 81 aa2.06□□□□□ -2.08
CDH13-209ENST00000567109 MT1EP04732 61 aa2.05□□□□□ -2.08
CDH13-209ENST00000567109 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
CDH13-209ENST00000567109 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
CDH13-209ENST00000567109 LCE1AQ5T7P2 110 aa2.04□□□□□ -2.08
CDH13-209ENST00000567109 KRTAP4-8A0A0G2JLE6 195 aa2.03□□□□□ -2.08
CDH13-209ENST00000567109 KRTAP4-8Q9BYQ9 185 aa2.03□□□□□ -2.08
CDH13-209ENST00000567109 LCE1DQ5T752 114 aa2.03□□□□□ -2.08
CDH13-209ENST00000567109 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.03□□□□□ -2.09
CDH13-209ENST00000567109 FCGBPQ9Y6R7 5405 aaPredicted RBP2.02□□□□□ -2.09
CDH13-209ENST00000567109 KRTAP9-7A8MTY7 169 aa2.01□□□□□ -2.09
CDH13-209ENST00000567109 KRTAP2-3P0C7H8 128 aa1.99□□□□□ -2.09
CDH13-209ENST00000567109 KRTAP2-4Q9BYR9 128 aa1.99□□□□□ -2.09
CDH13-209ENST00000567109 KRTAP2-1Q9BYU5 128 aa1.99□□□□□ -2.09
CDH13-209ENST00000567109 KRTAP19-7Q3SYF9 63 aa1.98□□□□□ -2.09
CDH13-209ENST00000567109 MT1MQ8N339 61 aa1.97□□□□□ -2.09
CDH13-209ENST00000567109 KRTAP20-1Q3LI63 56 aa1.97□□□□□ -2.09
CDH13-209ENST00000567109 LCE5AQ5TCM9 118 aa1.97□□□□□ -2.09
CDH13-209ENST00000567109 AHNAK2Q8IVF2 5795 aa1.92□□□□□ -2.1
CDH13-209ENST00000567109 PRM1P04553 51 aa1.92□□□□□ -2.1
CDH13-209ENST00000567109 KRTAP5-9P26371 169 aa1.92□□□□□ -2.1
CDH13-209ENST00000567109 MUC12Q9UKN1 5478 aa1.91□□□□□ -2.1
CDH13-209ENST00000567109 MT1AP04731 61 aa1.9□□□□□ -2.1
CDH13-209ENST00000567109 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
CDH13-209ENST00000567109 LCE1EQ5T753 118 aa1.89□□□□□ -2.11
CDH13-209ENST00000567109 LCE1FQ5T754 118 aa1.89□□□□□ -2.11
CDH13-209ENST00000567109 HMCN1Q96RW7 5635 aa1.88□□□□□ -2.11
CDH13-209ENST00000567109 KRTAP2-2Q9BYT5 123 aa1.87□□□□□ -2.11
CDH13-209ENST00000567109 KRTAP4-7Q9BYR0 210 aa1.86□□□□□ -2.11
CDH13-209ENST00000567109 LOC100996750A0A140TA64 210 aa1.84□□□□□ -2.11
CDH13-209ENST00000567109 LCE4AQ5TA78 99 aa1.83□□□□□ -2.12
CDH13-209ENST00000567109 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
CDH13-209ENST00000567109 MACF1Q9UPN3 7388 aaKnown RBP1.8□□□□□ -2.12
CDH13-209ENST00000567109 KRTAP4-3Q9BYR4 195 aa1.78□□□□□ -2.12
CDH13-209ENST00000567109 KRTAP4-9Q9BYQ8 210 aa1.75□□□□□ -2.13
CDH13-209ENST00000567109 SYNE1Q8NF91 8797 aaKnown RBP1.74□□□□□ -2.13
CDH13-209ENST00000567109 KRTAP9-9Q9BYP9 154 aa1.71□□□□□ -2.14
CDH13-209ENST00000567109 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
CDH13-209ENST00000567109 KRTAP9-4Q9BYQ2 154 aa1.68□□□□□ -2.14
CDH13-209ENST00000567109 OBSCNQ5VST9 7968 aa1.65□□□□□ -2.15
CDH13-209ENST00000567109 KRTAP6-1Q3LI64 71 aa1.64□□□□□ -2.15
CDH13-209ENST00000567109 KRTAP9-6A8MVA2 160 aa1.64□□□□□ -2.15
CDH13-209ENST00000567109 MUC5ACP98088 5654 aa1.6□□□□□ -2.15
CDH13-209ENST00000567109 DSTQ03001 7570 aaKnown RBP1.58□□□□□ -2.16
CDH13-209ENST00000567109 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
CDH13-209ENST00000567109 KRTAP5-4Q6L8H1 288 aa1.57□□□□□ -2.16
CDH13-209ENST00000567109 KRTAP5-5Q701N2 237 aaPredicted RBP1.51□□□□□ -2.17
CDH13-209ENST00000567109 KRTAP4-6Q9BYQ5 205 aa1.46□□□□□ -2.18
CDH13-209ENST00000567109 KRTAP4-11Q9BYQ6 195 aa1.41□□□□□ -2.18
CDH13-209ENST00000567109 KRTAP5-3Q6L8H2 238 aa1.39□□□□□ -2.19
CDH13-209ENST00000567109 KRTAP5-2Q701N4 177 aa1.36□□□□□ -2.19
CDH13-209ENST00000567109 KRTAP4-4Q9BYR3 166 aa1.36□□□□□ -2.19
CDH13-209ENST00000567109 KRTAP4-12Q9BQ66 201 aa1.36□□□□□ -2.19
CDH13-209ENST00000567109 KRTAP4-2Q9BYR5 136 aa1.36□□□□□ -2.19
CDH13-209ENST00000567109 MUC19Q7Z5P9 8384 aa1.35□□□□□ -2.19
CDH13-209ENST00000567109 KRTAP5-8O75690 187 aa1.27□□□□□ -2.21
CDH13-209ENST00000567109 KRTAP5-7Q6L8G8 165 aa1.22□□□□□ -2.21
CDH13-209ENST00000567109 KRTAP5-10Q6L8G5 202 aa1.19□□□□□ -2.22
CDH13-209ENST00000567109 KRTAP5-1Q6L8H4 278 aa1.16□□□□□ -2.22
CDH13-209ENST00000567109 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
CDH13-209ENST00000567109 KRTAP5-11Q6L8G4 156 aa1.11□□□□□ -2.23
CDH13-209ENST00000567109 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.09□□□□□ -2.24
CDH13-209ENST00000567109 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
CDH13-209ENST00000567109 KRTAP21-2Q3LI59 83 aa0.97□□□□□ -2.25
CDH13-209ENST00000567109 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 150.9 ms