RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 MIR22HGQ0VDD5 57 aa5.08□□□□□ -1.6
COMMD4-216ENST00000567023 MT1MQ8N339 61 aa5.07□□□□□ -1.6
COMMD4-216ENST00000567023 PSPHP1O15172 72 aa5.06□□□□□ -1.6
COMMD4-216ENST00000567023 MT1LQ93083 61 aa5.06□□□□□ -1.6
COMMD4-216ENST00000567023 TNP1P09430 55 aa5.05□□□□□ -1.6
COMMD4-216ENST00000567023 LCE1DQ5T752 114 aa5.04□□□□□ -1.6
COMMD4-216ENST00000567023 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
COMMD4-216ENST00000567023 RPS28P62857 69 aaKnown RBP5.01□□□□□ -1.61
COMMD4-216ENST00000567023 HMCN1Q96RW7 5635 aa5□□□□□ -1.61
COMMD4-216ENST00000567023 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
COMMD4-216ENST00000567023 MT4P47944 62 aa4.94□□□□□ -1.62
COMMD4-216ENST00000567023 K7ERS5 55 aa4.93□□□□□ -1.62
COMMD4-216ENST00000567023 KRTAP5-4Q6L8H1 288 aa4.93□□□□□ -1.62
COMMD4-216ENST00000567023 KRTAP4-3Q9BYR4 195 aa4.92□□□□□ -1.62
COMMD4-216ENST00000567023 A6NED7 52 aa4.9□□□□□ -1.63
COMMD4-216ENST00000567023 KRTAP25-1Q3LHN0 102 aa4.87□□□□□ -1.63
COMMD4-216ENST00000567023 AHNAK2Q8IVF2 5795 aa4.83□□□□□ -1.64
COMMD4-216ENST00000567023 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
COMMD4-216ENST00000567023 KRTAP4-6Q9BYQ5 205 aa4.82□□□□□ -1.64
COMMD4-216ENST00000567023 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
COMMD4-216ENST00000567023 KRTAP5-10Q6L8G5 202 aa4.76□□□□□ -1.65
COMMD4-216ENST00000567023 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
COMMD4-216ENST00000567023 CDC42SE1Q9NRR8 79 aa4.73□□□□□ -1.65
COMMD4-216ENST00000567023 SVIPQ8NHG7 77 aa4.7□□□□□ -1.66
COMMD4-216ENST00000567023 KRTAP5-5Q701N2 237 aaPredicted RBP4.69□□□□□ -1.66
COMMD4-216ENST00000567023 ROMO1P60602 79 aa4.66□□□□□ -1.66
COMMD4-216ENST00000567023 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
COMMD4-216ENST00000567023 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
COMMD4-216ENST00000567023 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
COMMD4-216ENST00000567023 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
COMMD4-216ENST00000567023 KRTAP5-7Q6L8G8 165 aa4.59□□□□□ -1.67
COMMD4-216ENST00000567023 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
COMMD4-216ENST00000567023 SYNE1Q8NF91 8797 aaKnown RBP4.54□□□□□ -1.68
COMMD4-216ENST00000567023 LOC100996750A0A140TA64 210 aa4.54□□□□□ -1.68
COMMD4-216ENST00000567023 KRTAP15-1Q3LI76 137 aa4.54□□□□□ -1.68
COMMD4-216ENST00000567023 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
COMMD4-216ENST00000567023 PRO0628Q9UI54 55 aa4.4□□□□□ -1.71
COMMD4-216ENST00000567023 BRK1Q8WUW1 75 aa4.36□□□□□ -1.71
COMMD4-216ENST00000567023 KRTAP5-2Q701N4 177 aa4.31□□□□□ -1.72
COMMD4-216ENST00000567023 MT1AP04731 61 aa4.3□□□□□ -1.72
COMMD4-216ENST00000567023 KRTAP6-1Q3LI64 71 aa4.28□□□□□ -1.72
COMMD4-216ENST00000567023 KRTAP4-11Q9BYQ6 195 aa4.27□□□□□ -1.73
COMMD4-216ENST00000567023 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
COMMD4-216ENST00000567023 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
COMMD4-216ENST00000567023 KRTAP5-8O75690 187 aa4.13□□□□□ -1.75
COMMD4-216ENST00000567023 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
COMMD4-216ENST00000567023 PMAIP1Q13794 54 aa4.12□□□□□ -1.75
COMMD4-216ENST00000567023 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
COMMD4-216ENST00000567023 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
COMMD4-216ENST00000567023 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
COMMD4-216ENST00000567023 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
COMMD4-216ENST00000567023 AHNAKQ09666 5890 aaKnown RBP3.97□□□□□ -1.77
COMMD4-216ENST00000567023 MT3P25713 68 aa3.95□□□□□ -1.78
COMMD4-216ENST00000567023 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
COMMD4-216ENST00000567023 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
COMMD4-216ENST00000567023 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
COMMD4-216ENST00000567023 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
COMMD4-216ENST00000567023 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
COMMD4-216ENST00000567023 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
COMMD4-216ENST00000567023 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
COMMD4-216ENST00000567023 H3BS24 57 aa3.31□□□□□ -1.88
COMMD4-216ENST00000567023 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
COMMD4-216ENST00000567023 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
COMMD4-216ENST00000567023 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
COMMD4-216ENST00000567023 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
COMMD4-216ENST00000567023 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
COMMD4-216ENST00000567023 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
COMMD4-216ENST00000567023 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
COMMD4-216ENST00000567023 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
COMMD4-216ENST00000567023 A0A0A0MQY5 61 aa3.04□□□□□ -1.92
COMMD4-216ENST00000567023 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
COMMD4-216ENST00000567023 INE1O15225 51 aa2.76□□□□□ -1.97
COMMD4-216ENST00000567023 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
COMMD4-216ENST00000567023 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
COMMD4-216ENST00000567023 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2.01
COMMD4-216ENST00000567023 PRM1P04553 51 aa2.38□□□□□ -2.03
COMMD4-216ENST00000567023 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
COMMD4-216ENST00000567023 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 90.8 ms