RNA–Protein interactions for RNA: ENST00000566850.1

C16orf62-223, Transcript of UPF0505 protein C16orf62, human

TSL 2

Gene C16orf62, Length 1,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C16orf62-223	ENST00000566850	SEC61G	P60059	68 aa		4.41	□□□□□ -1.7
C16orf62-223	ENST00000566850	CCDC179	H3BU77	68 aa		4.4	□□□□□ -1.71
C16orf62-223	ENST00000566850	ANAPC13	Q9BS18	74 aa		4.4	□□□□□ -1.71
C16orf62-223	ENST00000566850	MT1E	P04732	61 aa		4.38	□□□□□ -1.71
C16orf62-223	ENST00000566850	SPINT4	Q6UDR6	99 aa		4.36	□□□□□ -1.71
C16orf62-223	ENST00000566850		A8MU10	97 aa		4.35	□□□□□ -1.71
C16orf62-223	ENST00000566850		A0A1B0GU69	56 aa		4.33	□□□□□ -1.72
C16orf62-223	ENST00000566850	KRTAP9-6	A8MVA2	160 aa		4.33	□□□□□ -1.72
C16orf62-223	ENST00000566850	KRTAP19-3	Q7Z4W3	81 aa		4.31	□□□□□ -1.72
C16orf62-223	ENST00000566850	KRTAP19-5	Q3LI72	72 aa		4.3	□□□□□ -1.72
C16orf62-223	ENST00000566850	SMIM26	A0A096LP01	95 aa		4.26	□□□□□ -1.73
C16orf62-223	ENST00000566850	C10orf95	Q9H7T3	257 aa		4.26	□□□□□ -1.73
C16orf62-223	ENST00000566850	LCE3C	Q5T5A8	94 aa		4.25	□□□□□ -1.73
C16orf62-223	ENST00000566850	ATP5E	P56381	51 aa	Predicted RBP	4.24	□□□□□ -1.73
C16orf62-223	ENST00000566850	KRTAP5-1	Q6L8H4	278 aa		4.22	□□□□□ -1.73
C16orf62-223	ENST00000566850	LINC01558	Q9Y6Z2	57 aa		4.22	□□□□□ -1.73
C16orf62-223	ENST00000566850	LCE3A	Q5TA76	89 aa		4.21	□□□□□ -1.74
C16orf62-223	ENST00000566850	MT1L	Q93083	61 aa		4.19	□□□□□ -1.74
C16orf62-223	ENST00000566850	MT1G	P13640	62 aa		4.18	□□□□□ -1.74
C16orf62-223	ENST00000566850	MT1M	Q8N339	61 aa		4.17	□□□□□ -1.74
C16orf62-223	ENST00000566850	DST	Q03001	7570 aa	Known RBP	4.16	□□□□□ -1.74
C16orf62-223	ENST00000566850	TMEM258	P61165	79 aa		4.16	□□□□□ -1.74
C16orf62-223	ENST00000566850	PRR15L	Q9BU68	103 aa		4.14	□□□□□ -1.75
C16orf62-223	ENST00000566850	TNP1	P09430	55 aa		4.12	□□□□□ -1.75
C16orf62-223	ENST00000566850	KRTAP4-3	Q9BYR4	195 aa		4.12	□□□□□ -1.75
C16orf62-223	ENST00000566850	NDUFAF8	A1L188	74 aa		4.1	□□□□□ -1.75
C16orf62-223	ENST00000566850	PP632	Q6XCG6	107 aa		4.08	□□□□□ -1.76
C16orf62-223	ENST00000566850	PRAC1	Q96KF2	57 aa		4.08	□□□□□ -1.76
C16orf62-223	ENST00000566850	UQCR11	O14957	56 aa		4.05	□□□□□ -1.76
C16orf62-223	ENST00000566850	KRTAP4-4	Q9BYR3	166 aa		4.02	□□□□□ -1.77
C16orf62-223	ENST00000566850	KRTAP5-4	Q6L8H1	288 aa		4.01	□□□□□ -1.77
C16orf62-223	ENST00000566850	KRTAP12-3	P60328	96 aa		4	□□□□□ -1.77
C16orf62-223	ENST00000566850	MIR22HG	Q0VDD5	57 aa		3.98	□□□□□ -1.77
C16orf62-223	ENST00000566850	MT4	P47944	62 aa		3.95	□□□□□ -1.78
C16orf62-223	ENST00000566850	HMCN1	Q96RW7	5635 aa		3.94	□□□□□ -1.78
C16orf62-223	ENST00000566850	PSPHP1	O15172	72 aa		3.94	□□□□□ -1.78
C16orf62-223	ENST00000566850		Q1T7F1	81 aa		3.94	□□□□□ -1.78
C16orf62-223	ENST00000566850	KRTAP25-1	Q3LHN0	102 aa		3.91	□□□□□ -1.78
C16orf62-223	ENST00000566850	LCE3E	Q5T5B0	92 aa		3.88	□□□□□ -1.79
C16orf62-223	ENST00000566850	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.87	□□□□□ -1.79
C16orf62-223	ENST00000566850		V9GYY9	64 aa		3.86	□□□□□ -1.79
C16orf62-223	ENST00000566850	GPR98	Q8WXG9	6306 aa		3.84	□□□□□ -1.8
C16orf62-223	ENST00000566850	AHNAK2	Q8IVF2	5795 aa		3.82	□□□□□ -1.8
C16orf62-223	ENST00000566850		K7ERS5	55 aa		3.79	□□□□□ -1.8
C16orf62-223	ENST00000566850	OBSCN	Q5VST9	7968 aa		3.76	□□□□□ -1.81
C16orf62-223	ENST00000566850		A6NED7	52 aa		3.75	□□□□□ -1.81
C16orf62-223	ENST00000566850	KRTAP5-10	Q6L8G5	202 aa		3.75	□□□□□ -1.81
C16orf62-223	ENST00000566850	KRTAP20-2	Q3LI61	65 aa		3.74	□□□□□ -1.81
C16orf62-223	ENST00000566850	RPS28	P62857	69 aa	Known RBP	3.71	□□□□□ -1.82
C16orf62-223	ENST00000566850	SPRR5	A0A1B0GTR4	108 aa		3.69	□□□□□ -1.82
C16orf62-223	ENST00000566850	CDC42SE1	Q9NRR8	79 aa		3.66	□□□□□ -1.82
C16orf62-223	ENST00000566850	ROMO1	P60602	79 aa		3.64	□□□□□ -1.83
C16orf62-223	ENST00000566850	KRTAP12-4	P60329	112 aa		3.62	□□□□□ -1.83
C16orf62-223	ENST00000566850	SYNE1	Q8NF91	8797 aa	Known RBP	3.61	□□□□□ -1.83
C16orf62-223	ENST00000566850	KRTAP5-7	Q6L8G8	165 aa		3.58	□□□□□ -1.84
C16orf62-223	ENST00000566850	KRTAP6-1	Q3LI64	71 aa		3.56	□□□□□ -1.84
C16orf62-223	ENST00000566850	MT1A	P04731	61 aa		3.55	□□□□□ -1.84
C16orf62-223	ENST00000566850	KRTAP5-2	Q701N4	177 aa		3.51	□□□□□ -1.85
C16orf62-223	ENST00000566850	KRTAP6-2	Q3LI66	62 aa		3.37	□□□□□ -1.87
C16orf62-223	ENST00000566850	KRTAP5-8	O75690	187 aa		3.32	□□□□□ -1.88
C16orf62-223	ENST00000566850	PRO0628	Q9UI54	55 aa		3.32	□□□□□ -1.88
C16orf62-223	ENST00000566850	BRK1	Q8WUW1	75 aa		3.21	□□□□□ -1.9
C16orf62-223	ENST00000566850	LCE1C	Q5T751	118 aa		3.18	□□□□□ -1.9
C16orf62-223	ENST00000566850	LCE1B	Q5T7P3	118 aa		3.18	□□□□□ -1.9
C16orf62-223	ENST00000566850	LUZP6	Q538Z0	58 aa		3.13	□□□□□ -1.91
C16orf62-223	ENST00000566850	LCE3D	Q9BYE3	92 aa		3.11	□□□□□ -1.91
C16orf62-223	ENST00000566850	MUC5AC	P98088	5654 aa		3.1	□□□□□ -1.91
C16orf62-223	ENST00000566850	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.1	□□□□□ -1.91
C16orf62-223	ENST00000566850	AHNAK	Q09666	5890 aa	Known RBP	3.06	□□□□□ -1.92
C16orf62-223	ENST00000566850	PMAIP1	Q13794	54 aa		3	□□□□□ -1.93
C16orf62-223	ENST00000566850	KTN1-AS1	Q86SY8	53 aa		2.67	□□□□□ -1.98
C16orf62-223	ENST00000566850	MUC19	Q7Z5P9	8384 aa		2.66	□□□□□ -1.98
C16orf62-223	ENST00000566850	KRTAP21-2	Q3LI59	83 aa		2.36	□□□□□ -2.03
C16orf62-223	ENST00000566850	PHGR1	C9JFL3	82 aa		2.17	□□□□□ -2.06
C16orf62-223	ENST00000566850	INE1	O15225	51 aa		2.06	□□□□□ -2.08
C16orf62-223	ENST00000566850	PRM1	P04553	51 aa		1.89	□□□□□ -2.11
C16orf62-223	ENST00000566850	KRTAP21-1	Q3LI58	79 aa		1.6	□□□□□ -2.15
C16orf62-223	ENST00000566850	MUC16	Q8WXI7	14507 aa		1.44	□□□□□ -2.18

Retrieved 78 of 20,778 RNA–protein pairs in 139 ms