RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 RYR2Q92736 4967 aa3.16□□□□□ -1.9
SNX29-205ENST00000566228 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.14□□□□□ -1.91
SNX29-205ENST00000566228 KIAA1109Q2LD37 5005 aa3.12□□□□□ -1.91
SNX29-205ENST00000566228 KRTAP19-6Q3LI70 58 aa3.1□□□□□ -1.91
SNX29-205ENST00000566228 PCLOQ9Y6V0 5065 aa3.1□□□□□ -1.91
SNX29-205ENST00000566228 MT1AP04731 61 aa3.06□□□□□ -1.92
SNX29-205ENST00000566228 KRTAP19-2Q3LHN2 52 aa3.05□□□□□ -1.92
SNX29-205ENST00000566228 LCE2AQ5TA79 106 aaPredicted RBP3.05□□□□□ -1.92
SNX29-205ENST00000566228 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
SNX29-205ENST00000566228 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
SNX29-205ENST00000566228 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
SNX29-205ENST00000566228 LCE1AQ5T7P2 110 aa3.04□□□□□ -1.92
SNX29-205ENST00000566228 KRTAP4-7Q9BYR0 210 aa3.03□□□□□ -1.92
SNX29-205ENST00000566228 EPPK1P58107 5090 aaKnown RBP3.02□□□□□ -1.93
SNX29-205ENST00000566228 KRTAP2-3P0C7H8 128 aa3.01□□□□□ -1.93
SNX29-205ENST00000566228 KRTAP2-4Q9BYR9 128 aa3.01□□□□□ -1.93
SNX29-205ENST00000566228 LCE4AQ5TA78 99 aa3□□□□□ -1.93
SNX29-205ENST00000566228 FSIP2Q5CZC0 6907 aa2.99□□□□□ -1.93
SNX29-205ENST00000566228 KRTAP2-1Q9BYU5 128 aa2.99□□□□□ -1.93
SNX29-205ENST00000566228 KRTAP6-3Q3LI67 103 aa2.97□□□□□ -1.93
SNX29-205ENST00000566228 HERC1Q15751 4861 aa2.96□□□□□ -1.94
SNX29-205ENST00000566228 KRTAP4-3Q9BYR4 195 aa2.95□□□□□ -1.94
SNX29-205ENST00000566228 LOC100996750A0A140TA64 210 aa2.95□□□□□ -1.94
SNX29-205ENST00000566228 KRTAP4-9Q9BYQ8 210 aa2.94□□□□□ -1.94
SNX29-205ENST00000566228 KRTAP2-2Q9BYT5 123 aa2.86□□□□□ -1.95
SNX29-205ENST00000566228 SYNE2Q8WXH0 6885 aaKnown RBP2.86□□□□□ -1.95
SNX29-205ENST00000566228 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
SNX29-205ENST00000566228 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
SNX29-205ENST00000566228 KRTAP9-4Q9BYQ2 154 aa2.78□□□□□ -1.96
SNX29-205ENST00000566228 ABCA13Q86UQ4 5058 aa2.75□□□□□ -1.97
SNX29-205ENST00000566228 HMCN2Q8NDA2 5059 aa2.73□□□□□ -1.97
SNX29-205ENST00000566228 UBR4Q5T4S7 5183 aa2.68□□□□□ -1.98
SNX29-205ENST00000566228 KRTAP19-7Q3SYF9 63 aa2.68□□□□□ -1.98
SNX29-205ENST00000566228 FAT4Q6V0I7 4981 aa2.66□□□□□ -1.98
SNX29-205ENST00000566228 SYNE1Q8NF91 8797 aaKnown RBP2.65□□□□□ -1.99
SNX29-205ENST00000566228 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
SNX29-205ENST00000566228 RNF213Q63HN8 5207 aa2.58□□□□□ -2
SNX29-205ENST00000566228 MUC2Q02817 5179 aa2.53□□□□□ -2
SNX29-205ENST00000566228 NEBP20929 6669 aa2.42□□□□□ -2.02
SNX29-205ENST00000566228 MACF1Q9UPN3 7388 aaKnown RBP2.41□□□□□ -2.02
SNX29-205ENST00000566228 KRTAP4-6Q9BYQ5 205 aa2.38□□□□□ -2.03
SNX29-205ENST00000566228 KRTAP5-9P26371 169 aa2.33□□□□□ -2.04
SNX29-205ENST00000566228 KRTAP20-2Q3LI61 65 aa2.33□□□□□ -2.04
SNX29-205ENST00000566228 KRTAP9-6A8MVA2 160 aa2.32□□□□□ -2.04
SNX29-205ENST00000566228 KRTAP4-11Q9BYQ6 195 aa2.32□□□□□ -2.04
SNX29-205ENST00000566228 KMT2DO14686 5537 aa2.29□□□□□ -2.04
SNX29-205ENST00000566228 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
SNX29-205ENST00000566228 SSPOA2VEC9 5147 aa2.22□□□□□ -2.05
SNX29-205ENST00000566228 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
SNX29-205ENST00000566228 KRTAP4-12Q9BQ66 201 aa2.17□□□□□ -2.06
SNX29-205ENST00000566228 KRTAP4-2Q9BYR5 136 aa2.17□□□□□ -2.06
SNX29-205ENST00000566228 FCGBPQ9Y6R7 5405 aaPredicted RBP2.15□□□□□ -2.06
SNX29-205ENST00000566228 KRTAP5-4Q6L8H1 288 aa2.12□□□□□ -2.07
SNX29-205ENST00000566228 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
SNX29-205ENST00000566228 USH2AO75445 5202 aa2.05□□□□□ -2.08
SNX29-205ENST00000566228 KRTAP5-3Q6L8H2 238 aa2.02□□□□□ -2.09
SNX29-205ENST00000566228 GPR98Q8WXG9 6306 aa1.96□□□□□ -2.1
SNX29-205ENST00000566228 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
SNX29-205ENST00000566228 MUC12Q9UKN1 5478 aa1.87□□□□□ -2.11
SNX29-205ENST00000566228 MDN1Q9NU22 5596 aa1.86□□□□□ -2.11
SNX29-205ENST00000566228 KRTAP5-5Q701N2 237 aaPredicted RBP1.83□□□□□ -2.12
SNX29-205ENST00000566228 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
SNX29-205ENST00000566228 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
SNX29-205ENST00000566228 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
SNX29-205ENST00000566228 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
SNX29-205ENST00000566228 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
SNX29-205ENST00000566228 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
SNX29-205ENST00000566228 HMCN1Q96RW7 5635 aa1.49□□□□□ -2.17
SNX29-205ENST00000566228 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
SNX29-205ENST00000566228 KRTAP5-2Q701N4 177 aa1.48□□□□□ -2.17
SNX29-205ENST00000566228 KRTAP5-11Q6L8G4 156 aa1.46□□□□□ -2.18
SNX29-205ENST00000566228 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
SNX29-205ENST00000566228 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
SNX29-205ENST00000566228 KRTAP5-1Q6L8H4 278 aa1.37□□□□□ -2.19
SNX29-205ENST00000566228 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
SNX29-205ENST00000566228 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.18□□□□□ -2.22
SNX29-205ENST00000566228 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms