RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 A6NED7 52 aa5.09□□□□□ -1.59
HERPUD1-210ENST00000565966 K7ERS5 55 aa5.09□□□□□ -1.59
HERPUD1-210ENST00000565966 LCE3AQ5TA76 89 aa5.08□□□□□ -1.6
HERPUD1-210ENST00000565966 LCE5AQ5TCM9 118 aa5.07□□□□□ -1.6
HERPUD1-210ENST00000565966 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
HERPUD1-210ENST00000565966 KRTAP4-12Q9BQ66 201 aa5.06□□□□□ -1.6
HERPUD1-210ENST00000565966 MT1GP13640 62 aa4.98□□□□□ -1.61
HERPUD1-210ENST00000565966 KRTAP25-1Q3LHN0 102 aa4.98□□□□□ -1.61
HERPUD1-210ENST00000565966 DSTQ03001 7570 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-210ENST00000565966 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
HERPUD1-210ENST00000565966 MT1LQ93083 61 aa4.93□□□□□ -1.62
HERPUD1-210ENST00000565966 CDC42SE1Q9NRR8 79 aa4.91□□□□□ -1.62
HERPUD1-210ENST00000565966 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
HERPUD1-210ENST00000565966 MT1MQ8N339 61 aa4.88□□□□□ -1.63
HERPUD1-210ENST00000565966 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
HERPUD1-210ENST00000565966 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
HERPUD1-210ENST00000565966 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
HERPUD1-210ENST00000565966 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
HERPUD1-210ENST00000565966 ROMO1P60602 79 aa4.8□□□□□ -1.64
HERPUD1-210ENST00000565966 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
HERPUD1-210ENST00000565966 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.66
HERPUD1-210ENST00000565966 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
HERPUD1-210ENST00000565966 LCE1DQ5T752 114 aa4.68□□□□□ -1.66
HERPUD1-210ENST00000565966 LCE4AQ5TA78 99 aa4.68□□□□□ -1.66
HERPUD1-210ENST00000565966 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
HERPUD1-210ENST00000565966 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
HERPUD1-210ENST00000565966 BRK1Q8WUW1 75 aa4.59□□□□□ -1.67
HERPUD1-210ENST00000565966 MT4P47944 62 aa4.57□□□□□ -1.68
HERPUD1-210ENST00000565966 LCE3CQ5T5A8 94 aa4.52□□□□□ -1.69
HERPUD1-210ENST00000565966 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
HERPUD1-210ENST00000565966 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
HERPUD1-210ENST00000565966 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
HERPUD1-210ENST00000565966 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
HERPUD1-210ENST00000565966 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
HERPUD1-210ENST00000565966 KRTAP12-4P60329 112 aa4.34□□□□□ -1.71
HERPUD1-210ENST00000565966 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
HERPUD1-210ENST00000565966 PMAIP1Q13794 54 aa4.32□□□□□ -1.72
HERPUD1-210ENST00000565966 KRTAP20-2Q3LI61 65 aa4.31□□□□□ -1.72
HERPUD1-210ENST00000565966 SYNE1Q8NF91 8797 aaKnown RBP4.3□□□□□ -1.72
HERPUD1-210ENST00000565966 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
HERPUD1-210ENST00000565966 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
HERPUD1-210ENST00000565966 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
HERPUD1-210ENST00000565966 MT1AP04731 61 aa4.2□□□□□ -1.74
HERPUD1-210ENST00000565966 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
HERPUD1-210ENST00000565966 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
HERPUD1-210ENST00000565966 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
HERPUD1-210ENST00000565966 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
HERPUD1-210ENST00000565966 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
HERPUD1-210ENST00000565966 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
HERPUD1-210ENST00000565966 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
HERPUD1-210ENST00000565966 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
HERPUD1-210ENST00000565966 MT3P25713 68 aa3.85□□□□□ -1.79
HERPUD1-210ENST00000565966 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
HERPUD1-210ENST00000565966 KRTAP5-8O75690 187 aa3.78□□□□□ -1.8
HERPUD1-210ENST00000565966 SVIPQ8NHG7 77 aa3.75□□□□□ -1.81
HERPUD1-210ENST00000565966 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
HERPUD1-210ENST00000565966 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
HERPUD1-210ENST00000565966 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
HERPUD1-210ENST00000565966 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
HERPUD1-210ENST00000565966 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
HERPUD1-210ENST00000565966 LUZP6Q538Z0 58 aa3.43□□□□□ -1.86
HERPUD1-210ENST00000565966 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
HERPUD1-210ENST00000565966 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
HERPUD1-210ENST00000565966 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
HERPUD1-210ENST00000565966 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
HERPUD1-210ENST00000565966 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
HERPUD1-210ENST00000565966 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
HERPUD1-210ENST00000565966 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
HERPUD1-210ENST00000565966 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
HERPUD1-210ENST00000565966 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
HERPUD1-210ENST00000565966 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
HERPUD1-210ENST00000565966 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
HERPUD1-210ENST00000565966 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
HERPUD1-210ENST00000565966 PRM1P04553 51 aa2.47□□□□□ -2.01
HERPUD1-210ENST00000565966 INE1O15225 51 aa2.39□□□□□ -2.03
HERPUD1-210ENST00000565966 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
HERPUD1-210ENST00000565966 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
HERPUD1-210ENST00000565966 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 15.4 ms