RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 SPRR2DP22532 72 aa5.99□□□□□ -1.45
RNF40-207ENST00000565931 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
RNF40-207ENST00000565931 MT1LQ93083 61 aa5.96□□□□□ -1.46
RNF40-207ENST00000565931 KRTAP20-1Q3LI63 56 aa5.94□□□□□ -1.46
RNF40-207ENST00000565931 MT1GP13640 62 aa5.93□□□□□ -1.46
RNF40-207ENST00000565931 KRTAP2-3P0C7H8 128 aa5.91□□□□□ -1.46
RNF40-207ENST00000565931 KRTAP2-4Q9BYR9 128 aa5.91□□□□□ -1.46
RNF40-207ENST00000565931 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
RNF40-207ENST00000565931 MT1MQ8N339 61 aa5.83□□□□□ -1.48
RNF40-207ENST00000565931 PMAIP1Q13794 54 aa5.8□□□□□ -1.48
RNF40-207ENST00000565931 LCE3BQ5TA77 95 aa5.8□□□□□ -1.48
RNF40-207ENST00000565931 KRTAP15-1Q3LI76 137 aa5.76□□□□□ -1.49
RNF40-207ENST00000565931 KRTAP2-2Q9BYT5 123 aa5.76□□□□□ -1.49
RNF40-207ENST00000565931 KRTAP2-1Q9BYU5 128 aa5.76□□□□□ -1.49
RNF40-207ENST00000565931 PRO0628Q9UI54 55 aa5.73□□□□□ -1.49
RNF40-207ENST00000565931 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
RNF40-207ENST00000565931 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
RNF40-207ENST00000565931 KRTAP4-3Q9BYR4 195 aa5.69□□□□□ -1.5
RNF40-207ENST00000565931 DSTQ03001 7570 aaKnown RBP5.63□□□□□ -1.51
RNF40-207ENST00000565931 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
RNF40-207ENST00000565931 PRAC1Q96KF2 57 aa5.51□□□□□ -1.53
RNF40-207ENST00000565931 KTN1-AS1Q86SY8 53 aa5.38□□□□□ -1.55
RNF40-207ENST00000565931 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
RNF40-207ENST00000565931 SVIPQ8NHG7 77 aa5.35□□□□□ -1.55
RNF40-207ENST00000565931 LCE4AQ5TA78 99 aa5.34□□□□□ -1.55
RNF40-207ENST00000565931 KRTAP5-4Q6L8H1 288 aa5.33□□□□□ -1.56
RNF40-207ENST00000565931 KRTAP5-5Q701N2 237 aaPredicted RBP5.32□□□□□ -1.56
RNF40-207ENST00000565931 KRTAP4-9Q9BYQ8 210 aa5.3□□□□□ -1.56
RNF40-207ENST00000565931 KRTAP9-6A8MVA2 160 aa5.26□□□□□ -1.57
RNF40-207ENST00000565931 LCE1DQ5T752 114 aa5.22□□□□□ -1.57
RNF40-207ENST00000565931 MT4P47944 62 aa5.21□□□□□ -1.58
RNF40-207ENST00000565931 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
RNF40-207ENST00000565931 HMCN1Q96RW7 5635 aa5.11□□□□□ -1.59
RNF40-207ENST00000565931 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
RNF40-207ENST00000565931 MT1AP04731 61 aa5.08□□□□□ -1.6
RNF40-207ENST00000565931 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
RNF40-207ENST00000565931 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
RNF40-207ENST00000565931 KRTAP6-1Q3LI64 71 aa5.02□□□□□ -1.61
RNF40-207ENST00000565931 KRTAP20-2Q3LI61 65 aa4.99□□□□□ -1.61
RNF40-207ENST00000565931 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
RNF40-207ENST00000565931 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
RNF40-207ENST00000565931 GPR98Q8WXG9 6306 aa4.77□□□□□ -1.65
RNF40-207ENST00000565931 AHNAK2Q8IVF2 5795 aa4.76□□□□□ -1.65
RNF40-207ENST00000565931 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
RNF40-207ENST00000565931 KRTAP6-2Q3LI66 62 aa4.71□□□□□ -1.66
RNF40-207ENST00000565931 KRTAP5-10Q6L8G5 202 aa4.64□□□□□ -1.67
RNF40-207ENST00000565931 MT3P25713 68 aa4.62□□□□□ -1.67
RNF40-207ENST00000565931 LUZP6Q538Z0 58 aa4.55□□□□□ -1.68
RNF40-207ENST00000565931 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
RNF40-207ENST00000565931 KRTAP5-7Q6L8G8 165 aa4.4□□□□□ -1.71
RNF40-207ENST00000565931 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
RNF40-207ENST00000565931 KRTAP5-8O75690 187 aa4.3□□□□□ -1.72
RNF40-207ENST00000565931 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
RNF40-207ENST00000565931 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
RNF40-207ENST00000565931 LCE3DQ9BYE3 92 aa4.1□□□□□ -1.75
RNF40-207ENST00000565931 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
RNF40-207ENST00000565931 MUC5ACP98088 5654 aa4.05□□□□□ -1.76
RNF40-207ENST00000565931 KRTAP9-9Q9BYP9 154 aa3.99□□□□□ -1.77
RNF40-207ENST00000565931 H3BS24 57 aa3.93□□□□□ -1.78
RNF40-207ENST00000565931 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
RNF40-207ENST00000565931 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
RNF40-207ENST00000565931 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
RNF40-207ENST00000565931 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
RNF40-207ENST00000565931 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
RNF40-207ENST00000565931 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
RNF40-207ENST00000565931 AHNAKQ09666 5890 aaKnown RBP3.81□□□□□ -1.8
RNF40-207ENST00000565931 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
RNF40-207ENST00000565931 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
RNF40-207ENST00000565931 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
RNF40-207ENST00000565931 INE1O15225 51 aa3.34□□□□□ -1.87
RNF40-207ENST00000565931 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
RNF40-207ENST00000565931 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
RNF40-207ENST00000565931 PRM1P04553 51 aa3.18□□□□□ -1.9
RNF40-207ENST00000565931 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
RNF40-207ENST00000565931 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
RNF40-207ENST00000565931 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
RNF40-207ENST00000565931 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
RNF40-207ENST00000565931 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 8.8 ms