RNA–Protein interactions for RNA: ENST00000565582.5

FANCA-218, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-218ENST00000565582 A0A0A0MQY5 61 aa4.41□□□□□ -1.7
FANCA-218ENST00000565582 COA5Q86WW8 74 aa4.41□□□□□ -1.7
FANCA-218ENST00000565582 SPATA8Q6RVD6 105 aa4.39□□□□□ -1.71
FANCA-218ENST00000565582 KRTAP19-5Q3LI72 72 aa4.36□□□□□ -1.71
FANCA-218ENST00000565582 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
FANCA-218ENST00000565582 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
FANCA-218ENST00000565582 A0A1B0GU33 70 aa4.3□□□□□ -1.72
FANCA-218ENST00000565582 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
FANCA-218ENST00000565582 MT1GP13640 62 aa4.29□□□□□ -1.72
FANCA-218ENST00000565582 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
FANCA-218ENST00000565582 MT1MQ8N339 61 aa4.27□□□□□ -1.73
FANCA-218ENST00000565582 PP632Q6XCG6 107 aa4.25□□□□□ -1.73
FANCA-218ENST00000565582 A8MU10 97 aa4.24□□□□□ -1.73
FANCA-218ENST00000565582 MT4P47944 62 aa4.24□□□□□ -1.73
FANCA-218ENST00000565582 MT1LQ93083 61 aa4.24□□□□□ -1.73
FANCA-218ENST00000565582 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
FANCA-218ENST00000565582 LCE3AQ5TA76 89 aa4.2□□□□□ -1.74
FANCA-218ENST00000565582 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
FANCA-218ENST00000565582 C10orf95Q9H7T3 257 aa4.19□□□□□ -1.74
FANCA-218ENST00000565582 AHNAK2Q8IVF2 5795 aa4.18□□□□□ -1.74
FANCA-218ENST00000565582 UQCR11O14957 56 aa4.18□□□□□ -1.74
FANCA-218ENST00000565582 A0A1B0GU69 56 aa4.17□□□□□ -1.74
FANCA-218ENST00000565582 MIR22HGQ0VDD5 57 aa4.13□□□□□ -1.75
FANCA-218ENST00000565582 TNP1P09430 55 aa4.11□□□□□ -1.75
FANCA-218ENST00000565582 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
FANCA-218ENST00000565582 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
FANCA-218ENST00000565582 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
FANCA-218ENST00000565582 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
FANCA-218ENST00000565582 KRTAP5-10Q6L8G5 202 aa4.04□□□□□ -1.76
FANCA-218ENST00000565582 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
FANCA-218ENST00000565582 ROMO1P60602 79 aa4□□□□□ -1.77
FANCA-218ENST00000565582 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
FANCA-218ENST00000565582 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
FANCA-218ENST00000565582 K7ERS5 55 aa3.97□□□□□ -1.77
FANCA-218ENST00000565582 KRTAP15-1Q3LI76 137 aa3.96□□□□□ -1.78
FANCA-218ENST00000565582 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
FANCA-218ENST00000565582 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
FANCA-218ENST00000565582 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
FANCA-218ENST00000565582 KRTAP5-7Q6L8G8 165 aa3.88□□□□□ -1.79
FANCA-218ENST00000565582 KRTAP4-12Q9BQ66 201 aa3.87□□□□□ -1.79
FANCA-218ENST00000565582 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
FANCA-218ENST00000565582 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
FANCA-218ENST00000565582 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
FANCA-218ENST00000565582 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
FANCA-218ENST00000565582 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
FANCA-218ENST00000565582 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
FANCA-218ENST00000565582 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
FANCA-218ENST00000565582 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
FANCA-218ENST00000565582 MT1AP04731 61 aa3.59□□□□□ -1.83
FANCA-218ENST00000565582 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.83
FANCA-218ENST00000565582 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.83
FANCA-218ENST00000565582 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
FANCA-218ENST00000565582 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
FANCA-218ENST00000565582 KRTAP5-8O75690 187 aa3.49□□□□□ -1.85
FANCA-218ENST00000565582 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
FANCA-218ENST00000565582 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
FANCA-218ENST00000565582 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
FANCA-218ENST00000565582 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
FANCA-218ENST00000565582 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
FANCA-218ENST00000565582 MT3P25713 68 aa3.29□□□□□ -1.88
FANCA-218ENST00000565582 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
FANCA-218ENST00000565582 INE1O15225 51 aa3.21□□□□□ -1.9
FANCA-218ENST00000565582 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
FANCA-218ENST00000565582 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
FANCA-218ENST00000565582 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
FANCA-218ENST00000565582 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
FANCA-218ENST00000565582 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
FANCA-218ENST00000565582 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
FANCA-218ENST00000565582 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
FANCA-218ENST00000565582 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
FANCA-218ENST00000565582 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
FANCA-218ENST00000565582 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
FANCA-218ENST00000565582 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
FANCA-218ENST00000565582 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
FANCA-218ENST00000565582 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
FANCA-218ENST00000565582 PRM1P04553 51 aa1.95□□□□□ -2.1
FANCA-218ENST00000565582 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
FANCA-218ENST00000565582 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 145.1 ms